MSMEG1224
ms1224
-
M. smegmatis · MC2-155
[AlphaFold] [Orthologs] [UniProt] [MycoBrowser] [TnSeq DB] [SeqHub]
MC2-155 Coordinates: 1292948 – 1293064
Vulnerability Index (VI):
M. tuberculosis homologs
M. abscessus homologs MAB0591
 +5   0  -5 -10 -15 sgRNA L2FC (+ATc/–ATc) TnSeq Gene Essentiality Predictions (1, 2) Essential Growth Defect Non-Essential Growth Advantage Unknown Operon Legend (3) Operon TSS Legend ? Ju, 2024 (4) Li, 2017 (5) (1) PMID: 28096490 (2) PMID: 31388080 (3) PMID: 26536359 (4) PMID: 38418874 (5) PMID: 29326668 MSMEG1220 MSMEG1221 MSMEG1222 MSMEG1223 MSMEG1224 MSMEG1225 MSMEG1226
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>ms1224_MSMEG1224_dna
GCCACCTCGAAATCCAGTGCGACCTGGCCGCCGATGACCATCGCCTTCGCTTGCTCGAGCAGAATGCCCAGCTCAGCATCGGTATGAGCTGATCCGAGATGGGCCAGGATCACCACCTTGCCCGCGTCTTTGCGGGCGACCTGCACCGCCACCGCGCCCGAGGCAGTGCGCACTTTCCGCACGTACGCCACCGCACGAACCTACCCTGTTAGTACCCCAAAACACCCACCCGCCAGCGCAACACCGCAGGTCAAACGACTACCGGCCCCCAAAACCGGCCGACATGTCCAAACTCAGGCGTGTGGATCGTCGGGGAGCTCACCGACTGGGTCGGGCACCCGCCGGAGCAACTCGCTGCGATGCGCCAGGGGCTCGAGGAGCTCCGGCGCAAGGGGCTGGCGGTCATCTATGACTAG

Protein Sequence 

>Ms1224_MSMEG1224_protein
VWIVGELTDWVGHPPEQLAAMRQGLEELRRKGLAVIYD

Essentiality:

Call Condition Type Source Notes
Unknown in vitro CRISPRi [Bosch & DeJesus et al. (2021)]
Non Essential in vitro TnSeq [Dragset et al. (2019)]

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