MSMEG1864
ms1864
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M. smegmatis · MC2-155
[AlphaFold] [Orthologs] [UniProt] [MycoBrowser] [TnSeq DB] [SeqHub]
MC2-155 Coordinates: 1940145 – 1940354
Vulnerability Index (VI):
M. tuberculosis homologs
M. abscessus homologs MAB2088
background  +5   0  -5 -10 -15 sgRNA L2FC (+ATc/–ATc) TnSeq Gene Essentiality Predictions (1, 2) Essential Growth Defect Non-Essential Growth Advantage Unknown Operon Legend (3) Operon (1) PMID: 28096490 (2) PMID: 31388080 (3) PMID: 26536359 MSMEG1859 MSMEG1860 MSMEG1861 MSMEG1862 MSMEG1863 MSMEG1864 MSMEG1865 MSMEG1866 MSMEG1867
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>ms1864_MSMEG1864_dna
CCGGCCGGCGGGGACACCTCCAGATCCAGCACCGCCTGGTTGGCCGCCAACCGCTCGGCAGCGGAGGCCTTGAGCGCTGCGAGCTCGGCCTCATCATGGGCCGAGCCCACATGCTCGATGTTGCGTGACCCGCGTCGGGTGGACCACACGATCTGCACCGCAGTGGCCCCCGAAGCGGTCTTCACTGTGCGCACGTACGCCACCAGGGCAGCCTACGGCCCGACCTTAGTGCGCAAATTCCGGCCGAGCCGACTCCGAAACTGCAGGTCAAGAACCCGCCACTACCCCAAACCGGAAACCGTGAGCCAAGTCAGGAACAACCGACTGCGCAAGGAGTGCCTGAACCGCAACCACTGGAACACCCTGCTCGAGGCCCGGGTGGTCATCGGCGACTTCAAAGACGAGCACAACCACCGACACCGACACTCGGCGCTGGGCTACCGCACGCCGGCCGAGTACGCTGCCGTCTGCAGCTGCACCCACACACCGGTGGCCTGCAGCATCAACTGA

Protein Sequence 

>Ms1864_MSMEG1864_protein
VSQVRNNRLRKECLNRNHWNTLLEARVVIGDFKDEHNHRHRHSALGYRTPAEYAAVCSCTHTPVACSIN

Essentiality:

Call Condition Type Source Notes
Unknown in vitro CRISPRi [Bosch & DeJesus et al. (2021)]
Non Essential in vitro TnSeq [Dragset et al. (2019)]

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