MSMEG2333
ms2333
-
M. smegmatis · MC2-155
[AlphaFold] [Orthologs] [Phyre2] [UniProt] [MycoBrowser] [TnSeq DB] [SeqHub]
MC2-155 Coordinates: 2414990 – 2416273
Vulnerability Index (VI):
M. tuberculosis homologs Rv3035
M. abscessus homologs MAB3379
background  +5   0  -5 -10 -15 sgRNA L2FC (+ATc/–ATc) TnSeq Gene Essentiality Predictions (1, 2) Essential Growth Defect Non-Essential Growth Advantage Unknown Operon Legend (3) Operon (1) PMID: 28096490 (2) PMID: 31388080 (3) PMID: 26536359 MSMEG2330 MSMEG2331 MSMEG2332 MSMEG2333 MSMEG2334 MSMEG2335 fni MSMEG2338
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>ms2333_MSMEG2333_dna
CACCATGCCGCGGGTGATGATGTGCGGGTTGGCCAGCTTGAACTTGAGCAGCCGCCAGTACCGCACCAGGTACCAGGGCGTGAACGCCCGGTTGGCGATGACCCACTTCAGCGACGCCATGGTCAGGAAGTCGGCTTGACGCGGATCGCGCAGACGCGAGCCCCGCCACCGCTTGTGAATCGGTGCGCCCCACATCGTCGTCATGGCCGGAAAGCCTACGCGAGGCTTTCCGGGCGCTCGGGTTACCCTCACGTGGTCCACAACTCAACGATCTGTCCGGTCTCTCGACGAAAGGACACCGTGTTCCGGCGATACCTGGCGCTCATGGTGGCTGCGCTGCTCACGGGCCTTCTCGCCGGTTGTGAGAACACCGATTCCTGGGTCCAGGCCAGCCCTGCCTCCGGTTGGGCCGCGCAATACGCCGACGCCGCCAACAGCAGCTACAAAAGTGCTCCCGGAGCCCAGTCGCTGCGCGCGGAGTGGAGCCGGTCGGCCAAAGGTGAGGTAGGCGCCCAGGTCGCCCTGGGTTCGGCCGGTTATCTCGCGGTCAACGCCCAGAGCGCGGGCGGGTGTTCGCTGATGGTGTGGGAGGCCGACAACAACGGCCGCCAGCGCTGGTGCACGCGTCTGGTGCAGGGCGGCGGATGGTCGGGCCCGCTGTTCGATGGCTTCGACAACGTCTATGTGGGCCAGCCCGGCGCGATGCTGTCCTTTCCTCCCACGCAGTGGATCCGCTGGCGTAAGCCCGTGATCGGGATGCCGACCACCCCGCGACTGCTGGCCGACGGGCAACTCCTCGTGGTCACGCACCTCGGCCAGGTGCTGGTGTTCGACTCCCACCGCGGCACGGTCGAGGGCACACCTCTCGATCTGGTGTCGGGCGTGGACCCGACCGATTCCGAGCGCGGTCTGGCCGACTGCCCGCTGGCCCGGTCGCGGTGCCCCGTCGCGGCGGCGCCCGCGTTCTCCGGCCAGACCAACATCGTGGTGCTGAGCCTGTGGCAGCCCGGTGCCGAGGCCCCGGTGCTGGTCGGCCTGAACTACCGGCCCGGGCAGAAGCCGCTGCTGACGCAGGCGTGGACCAGTGACGCCGCGGGCCGCGGCCCGCTGGCCAGCCCGGTGCTGTCCGCGGACGGCCAGACCGTCTACGTCAGCGGGCGCGACGAGCAACTGTGGGCGCTGAACTCCGCGGACGGGACCGTCAAATGGTCCGTGCCGCTCGACTATCTCGCCCAGACGCCGCCGTCGGTGGCGCCGGACGGTCTGATCGTGGCGGGCGGCGGTCCCGACGCCAAGCTGACCGCGGTGCGCGACGAGGGTGACCGCGGCGAGATCGTGTGGACGCGTGACGACGTCGCTCCCCTGACCACGTCGAGTCGTTCCGGAAACGTCGGCTACGCCGTGGCGCGGCAGGGCGGCCACGGGCAGGCCCTGCTGGTCTTCGACACCGGTGACGGCCGCACGCTGCAGACCCATCCGCTTCCCGAGGCCACCGGCTGGCCGGTCGGGGTATCGATCGGCCACGACGGCCGCGTGGTCACCGCGACGAGTGACGGGCAAGTGTATGGCTTCTCACCGGCATGA

Protein Sequence 

>Ms2333_MSMEG2333_protein
VFRRYLALMVAALLTGLLAGCENTDSWVQASPASGWAAQYADAANSSYKSAPGAQSLRAEWSRSAKGEVGAQVALGSAGYLAVNAQSAGGCSLMVWEADNNGRQRWCTRLVQGGGWSGPLFDGFDNVYVGQPGAMLSFPPTQWIRWRKPVIGMPTTPRLLADGQLLVVTHLGQVLVFDSHRGTVEGTPLDLVSGVDPTDSERGLADCPLARSRCPVAAAPAFSGQTNIVVLSLWQPGAEAPVLVGLNYRPGQKPLLTQAWTSDAAGRGPLASPVLSADGQTVYVSGRDEQLWALNSADGTVKWSVPLDYLAQTPPSVAPDGLIVAGGGPDAKLTAVRDEGDRGEIVWTRDDVAPLTTSSRSGNVGYAVARQGGHGQALLVFDTGDGRTLQTHPLPEATGWPVGVSIGHDGRVVTATSDGQVYGFSPA

Essentiality:

Call Condition Type Source Notes
Unknown in vitro CRISPRi [Bosch & DeJesus et al. (2021)]
Growth Advantage in vitro TnSeq [Dragset et al. (2019)]

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