MSMEG2830
ms2830
-
M. smegmatis · MC2-155
[AlphaFold] [Orthologs] [Phyre2] [UniProt] [MycoBrowser] [TnSeq DB] [SeqHub]
MC2-155 Coordinates: 2892622 – 2893989
Vulnerability Index (VI):
M. tuberculosis homologs Rv3349c, Rv0741, Rv3798, Rv1313c
M. abscessus homologs
background  +5   0  -5 -10 -15 sgRNA L2FC (+ATc/–ATc) TnSeq Gene Essentiality Predictions (1, 2) Essential Growth Defect Non-Essential Growth Advantage Unknown Operon Legend (3) Operon (1) PMID: 28096490 (2) PMID: 31388080 (3) PMID: 26536359 MSMEG2826 MSMEG2827 MSMEG2828 MSMEG2829 MSMEG2830 MSMEG2831 MSMEG2832 MSMEG2833 MSMEG2834 MSMEG2835 MSMEG2836 MSMEG2837
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>ms2830_MSMEG2830_dna
CAAATGGTCGCCGAAACCTCCCCCTCCGACTTCACGGTTCAAGAGCTGATCGCCCTGGCGGCGGTGGTTCGGCCGGTCTACGAGCGGGTGATGGCGGGACTCGCACCGCCGGGACATGTCCTCAAGCTTGTACCCCCAACACGGTAGTAGGGGTGGGTCGAAGCCCCACATCTGAAAAGGGTGTCCGATCATACGGGCACCCTTTTTTGTTGGTGTTAAACAGGCTCTTCGCACTTGATAGGGGTCTGGTGTTGTCCGACGTTGTGTCGTGTCGGTGATTGATTAGGGGTCCGCGCCCCTGTGAGCTGGGTGTTCTTCAGGCATCCAGGACAAGGAACGCGGACCATGGTTGACGGTAGTTCACTGCTGCTCGATCTCGACGGTGTGGTCGTCGAATCGGTGCAGCGCCTCGAGGACGGCACCCGGTTGGTGCAGGTGCTCACCGCCCCCCAGTGGGTCGGGATCTGCCCCGAATGCGGGGAACGCTCCACCAGGTCGAAAGGCTGGGTACAGACCGGACCCCGCGACGTTGTGGTGGGTCCGGACCGCCCGATACTGCGCTGGCGTAAGCGAAAGTGGTTGTGCCCCAGCACGGTCTGTACGCGCAAGGTGTTCACCGAGTCGGTGCCCGGAATCCCGGCGCGGGCGCGGGTAACACCGCGGGCCAAGGCGACGATGGCCACTGCGGTGCTCGACGAGGACCGTTCGGTGGCCGCGGTGGCCGGGCAGTACCGCTGCGGCTGGCACACCGTGCACGACGAAGTCATCGCCACCGCCGAGGACGCCCTGGCCGGCGAGCTGGCGCCGGTGGCGGTGCTCGGCATCGACGAGACCCGACGCGGTAAGGCCAAATGGGAACACAACCCGGTACTCGGGCGGCGGGTATGGGTGGATCGCTGGGACACCGGACTGGTCGACATCACCGGCGATCAAGGCCTCCTTGGCCAGGTCAACGGCCGCACCTCGGCGGCAGTGATCGACTGGCTCGCTGGCCAGGACCCTGACTGGCGGGCCGCAATCACCCACGTAGCCATCGACCTGTCCCCGGCCTATGCCCGGGTGGCTCGCGAAGCACTGCCGCACGCGATCCTGATCGCCGACCGGTTCCACCTGGTCAAGAAAGCCAACGACATGGTTGATGCGGTGCGCCGCCGGGTCACCTGGACCCAACGGGGCCGGCGCGGCCGCAAGGCCGATGTCGAGTGGATCAACCGCCGCCGCCTGCTGCGCGGCTCCGAGCGGCTCACCGCAGACCAACGCGCCACGTTGTTCGCCAAGCTGCTCTCCGCCGACCCCAACCAGGACATCGCCGCGGCCTGGATCGCCAAAGAACTGCTGCGCGACCTGCTTTCCTGCGCCGACCGCGGCGGGTTGCGCTACGAGATCACGACCGCCCTGGACCGGTTCTACCGTTTCTGCGCGGCCTGCACAGTGCCCGAAGTGATCCGACTGGCCCGCACCATCGAGACCTGGCAGGCCCCCATCATCGCCGCCCTGCAGACCGGCCTGTCCAACGCCCGCACCGAAGGCTACAACCGCATCGTCAAACACGTCGGGCGCATCGCCTTCGGCTTCCGCAATCCTGAGAACCAACGCCGCCGAGTACGGTGGGCCTGCACTCGCCGATCACGACGAGTCACACCCAGCCGGCACCAACGCCACTGCTAA

Protein Sequence 

>Ms2830_MSMEG2830_protein
VSWVFFRHPGQGTRTMVDGSSLLLDLDGVVVESVQRLEDGTRLVQVLTAPQWVGICPECGERSTRSKGWVQTGPRDVVVGPDRPILRWRKRKWLCPSTVCTRKVFTESVPGIPARARVTPRAKATMATAVLDEDRSVAAVAGQYRCGWHTVHDEVIATAEDALAGELAPVAVLGIDETRRGKAKWEHNPVLGRRVWVDRWDTGLVDITGDQGLLGQVNGRTSAAVIDWLAGQDPDWRAAITHVAIDLSPAYARVAREALPHAILIADRFHLVKKANDMVDAVRRRVTWTQRGRRGRKADVEWINRRRLLRGSERLTADQRATLFAKLLSADPNQDIAAAWIAKELLRDLLSCADRGGLRYEITTALDRFYRFCAACTVPEVIRLARTIETWQAPIIAALQTGLSNARTEGYNRIVKHVGRIAFGFRNPENQRRRVRWACTRRSRRVTPSRHQRHC

Essentiality:

Call Condition Type Source Notes
Unknown in vitro CRISPRi [Bosch & DeJesus et al. (2021)]
Non Essential in vitro TnSeq [Dragset et al. (2019)]

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