MSMEG2983
ms2983
-
M. smegmatis · MC2-155
[AlphaFold] [Orthologs] [UniProt] [MycoBrowser] [TnSeq DB] [SeqHub]
MC2-155 Coordinates: 3048445 – 3048876
Vulnerability Index (VI):
M. tuberculosis homologs Rv2576c
M. abscessus homologs MAB2871c
 +5   0  -5 -10 -15 sgRNA L2FC (+ATc/–ATc) TnSeq Gene Essentiality Predictions (1, 2) Essential Growth Defect Non-Essential Growth Advantage Unknown Operon Legend (3) Operon TSS Legend ? Ju, 2024 (4) Li, 2017 (5) (1) PMID: 28096490 (2) PMID: 31388080 (3) PMID: 26536359 (4) PMID: 38418874 (5) PMID: 29326668 MSMEG2980 MSMEG2981 MSMEG2982 MSMEG2983 MSMEG2984 MSMEG2985 MSMEG2986
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>ms2983_MSMEG2983_dna
GTGATAACGCTTCCGGTGGCCAACGCCGAACGCCGGATCGTGGCACGTCCTCGAACTCGCATGAACAACCTTTCCCGATGATTGCAGCGCATTTTGGGCCGATCGCCTCGGCCGCGGTGCAGGAGGTTAAACACACTGTGCTGGTGTCGAATCGGGACGTTAGAGCGCGCGTGTTACTGCCAAATGTCTGTGTGTGACGAACAAATTAACCTCGACATGACATGCCGCTGGTTTGCCGCCGGTTCTCGACGCCGTGACACCGGCGTGGCGTGTGTAACGGGGAGGTAGCCTGCGTCGATATGACGAACATGCGAAACGTGACGAAGAGGGTCGGCGCCGCGGTGTTGGCGGCGTCGGCGTCCATTGCGGTGGTGGGACAGGCGACAGCGCATGCGGAGCCCGAGGGCCACCAGGTCCGTTACACATTGACGTCTGGCGCGCCTTACGAGTTCGACCTCTACTATCTGGCGACGCAGCCCGCGGACAAGGCGGCCTACGACGCCGATCCGTACGCCTACCTGCAGAAGGCCGAGGTGAACGTCGCTCCGGACGCGCCATGGGTCTTCGAGACCACACTGGCCGATCCGCAGTGGGCGATCTTCACGGTGTCCAGCACGACGCACGGCGGACGGGGCGCGCCGAACGCGCACTGTGAGATCGCCGTCGACGGCGAGATCGCGACGCAGAACGACCACCCGTACAGCCCGCGGTGCCAGCTGGGCAACTGGTGA

Protein Sequence 

>Ms2983_MSMEG2983_protein
MTNMRNVTKRVGAAVLAASASIAVVGQATAHAEPEGHQVRYTLTSGAPYEFDLYYLATQPADKAAYDADPYAYLQKAEVNVAPDAPWVFETTLADPQWAIFTVSSTTHGGRGAPNAHCEIAVDGEIATQNDHPYSPRCQLGNW

Essentiality:

Call Condition Type Source Notes
Unknown in vitro CRISPRi [Bosch & DeJesus et al. (2021)]
Non Essential in vitro TnSeq [Dragset et al. (2019)]

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