MSMEG3341
ms3341
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M. smegmatis · MC2-155
[AlphaFold] [Orthologs] [Phyre2] [UniProt] [MycoBrowser] [TnSeq DB] [SeqHub]
MC2-155 Coordinates: 3417007 – 3418218
Vulnerability Index (VI):
M. tuberculosis homologs Rv2013, Rv2014
M. abscessus homologs
background  +5   0  -5 -10 -15 sgRNA L2FC (+ATc/–ATc) TnSeq Gene Essentiality Predictions (1, 2) Essential Growth Defect Non-Essential Growth Advantage Unknown Operon Legend (3) Operon (1) PMID: 28096490 (2) PMID: 31388080 (3) PMID: 26536359 MSMEG3336 MSMEG3337 MSMEG3338 MSMEG3339 MSMEG3340 MSMEG3341 MSMEG3342 MSMEG3343 MSMEG3344
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>ms3341_MSMEG3341_dna
CGGACACCGCTGGACCGACCACCGCCAGCCACACCCGCCTAATGGGTGTTGATCGGCGTGCCTCGAACGGATAACCGTCCAGCGCGGGGACGCTGATCACCGAGCCGCTGGCCGGTGAGCACTCCTGCCGCCTGGAACGATGGTCGATTTCTAGGGTTAGATCGTGCCCCGGCCGGTTGGTGAGGTCATCTACAGCGCTCATGGGATGTCGTGCCGGTTCGAGCACTGATCCATTAGGTCGCCGCCAGATGTCCTTCGGCTCGAACGGTTTCATCCACATCGAGCCAAGGAGGCGATGCGATGCTCTTCGTCGGAGACGACTGGGCAGAAGACCACCACGACCTGTACCTGATGAACGAGGCCGGCGACAGGCTGGCCTCACGGCGGCTGCCCGAGGGGCTGGCCGGAATTCGACTACTGCACGATCTCATCGCGGCCCACGCCGATGACCCCGCTCAGGTCGCCGTCGGAATCGAAACCGACCGCGGACTGTGGGTGGAGGCACTGACCGGCGCCGGTTATCAGGTGTACGCGGTCAATCCGCTGGCTGTGGCCCGCTATCGCGACCGCCACGCGGTGTCGGGAGCCAAGTCCGATGCCGCCGACGCCAAGCTGTTGGCCGATCTAGTGCGCACCGACCGACACAACCACCGTCTGATCGCCGGCGACACACCCGACGCCGAAGCGGTCAAGGTCCTCGCGCGGGCGCATCAGAATCTGATCTGGACCCGCAACCGGCACACCAACGCACTGCGCTCGGCACTACGCGAGTACTACCCCGCGGCGCTGGAGGCCTTCGACGATCTGTCCGACCGCGACGCGTTGGCGATCCTCGGACATGCACCCGACCCCCGACAAGCATCCAGCCTGAGCCTGGCCAAGATCCGCTCCGCACTCAAAGCTGCTGGGCGCCAACGCAACATCGACATCCGAGCCCAGGAGATCCAGGCCGCACTACGATCCGAACAACTCGCAGCACCGGCTGCGGTCACCGCGGCGTTCGCAGCGACAACGCGGGCCACCGTCGGGCTCGTCGTCGAGTTGAGTCGTCAGATCGACGACCTGGAGAACGAACTGGCCGCGCATTTTGAGACGCACCCGGACGCCGACATCTACCGCTCCCTGCCAGGACTTGGTGTCATCCTCGGCGCCCGGGTGCTCGGTGAGTTCGGGGACGACCCGAACCGATACACCAACGCCAAGTGTCGCAAAAACTACGCCGGAACCTCGCCATTGACCATTGCGTCCGGCAGGAAGCGCGCCGTACTGGCCCGCCACATCCGCAACCGTCGGCTCTACGACGCGATCGACCAGTGGGCCTTCTGCGCGCTAACCCGAAGTCCCGGAGCTCGACAGTTCTACGACCATCGCCGCGCTGAAGGCGACCTCCATCACCAAGCACTGCGGGCTCTGGGCAACCGCCTCGTCGGCATCCTGCACGGTTGCCTACGCCACCGGACCCGCTACGACGAACACAAAGCCTGGGCACACCGCACACCTGCCGCCGCTTGA

Protein Sequence 

>Ms3341_MSMEG3341_protein
MLFVGDDWAEDHHDLYLMNEAGDRLASRRLPEGLAGIRLLHDLIAAHADDPAQVAVGIETDRGLWVEALTGAGYQVYAVNPLAVARYRDRHAVSGAKSDAADAKLLADLVRTDRHNHRLIAGDTPDAEAVKVLARAHQNLIWTRNRHTNALRSALREYYPAALEAFDDLSDRDALAILGHAPDPRQASSLSLAKIRSALKAAGRQRNIDIRAQEIQAALRSEQLAAPAAVTAAFAATTRATVGLVVELSRQIDDLENELAAHFETHPDADIYRSLPGLGVILGARVLGEFGDDPNRYTNAKCRKNYAGTSPLTIASGRKRAVLARHIRNRRLYDAIDQWAFCALTRSPGARQFYDHRRAEGDLHHQALRALGNRLVGILHGCLRHRTRYDEHKAWAHRTPAAA

Essentiality:

Call Condition Type Source Notes
Unknown in vitro CRISPRi [Bosch & DeJesus et al. (2021)]
Non Essential in vitro TnSeq [Dragset et al. (2019)]

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