MSMEG4319
ms4319
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M. smegmatis · MC2-155
[AlphaFold] [Orthologs] [Phyre2] [UniProt] [MycoBrowser] [TnSeq DB] [SeqHub]
MC2-155 Coordinates: 4405775 – 4405846
Vulnerability Index (VI):
M. tuberculosis homologs tRNA-Val23
M. abscessus homologs tRNA-Val(TAC)29
background  +5   0  -5 -10 -15 sgRNA L2FC (+ATc/–ATc) TnSeq Gene Essentiality Predictions (1, 2) Essential Growth Defect Non-Essential Growth Advantage Unknown Operon Legend (3) Operon (1) PMID: 28096490 (2) PMID: 31388080 (3) PMID: 26536359 MSMEG4314 MSMEG4315 MSMEG4316 MSMEG4317 MSMEG4318 MSMEG4319 MSMEG4320 MSMEG4321 MSMEG4322 aceE
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>ms4319_MSMEG4319_dna
CCCACGCACAAGATCTGGTCCATCGAAAGCGGATTCACCTTCCCGGTGCTGTCGGATTTCTGGCCGCACGGCAAGGTGGCCCGGGACTACGGCGTGTTCAACGAGGACGCGGGCTATCCCAACCGCGGCACCTTCGTCGTCGACCGCTCCGGCATCATCCGGTTCGCCGAGATGATGGAGCCCGGTCAGGTGCGCGACCAGAAAGTCTGGACTGCGGCACTGCAGGCGCTGCGCGCCTGACTAAGATCCCGGTGTGGGATTTCCGGTCACGGCGCTTGGCCGTGTACCGTGCCTGCGGCGGGGCGCGTAGCTCAGTGGTAGAGCTCTGGTTTTACACACCAGCGGTCGGCGGTTCGATACCGTCCGCGCCCA

Protein Sequence 

>Ms4319_MSMEG4319_protein
GRVAQW_SSGFTHQRSAVRYRPRP

Essentiality:

Call Condition Type Source Notes
Unknown in vitro CRISPRi [Bosch & DeJesus et al. (2021)]
Unknown in vitro TnSeq [Dragset et al. (2019)]

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