MSMEG5096
ms5096
-
M. smegmatis · MC2-155
[AlphaFold] [Orthologs] [UniProt] [MycoBrowser] [TnSeq DB] [SeqHub]
MC2-155 Coordinates: 5196509 – 5196844
Vulnerability Index (VI):
M. tuberculosis homologs Rv3474, Rv3381c, Rv3325, Rv3186, Rv3184, [+ 11 remaining orthologs]
M. abscessus homologs
 +5   0  -5 -10 -15 sgRNA L2FC (+ATc/–ATc) TnSeq Gene Essentiality Predictions (1, 2) Essential Growth Defect Non-Essential Growth Advantage Unknown Operon Legend (3) Operon TSS Legend ? Ju, 2024 (4) Li, 2017 (5) (1) PMID: 28096490 (2) PMID: 31388080 (3) PMID: 26536359 (4) PMID: 38418874 (5) PMID: 29326668 MSMEG5093 MSMEG5094 MSMEG5095 MSMEG5096 MSMEG5097 MSMEG5098 MSMEG5099 MSMEG5100 MSMEG5101
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>ms5096_MSMEG5096_dna
GCGATGGCATCTTCTCCGCTACCTGCTCCGACACCGAGGCGGTCAAGCGATTTCATCGCTGCGCGAACGAAGGTGCCCTCCGGCGACATCAGATCGAGGACGGATTTTCGATCCATCGATTCGTGTATTGGAGCGTGTCGTCCAGGCTTGATTGAGTTAACGAAGTGGTCGGCATGGGTGACGGAGAAACTCCAGGGTCGGAGCACCCAGAAATTCCAAGGGTCAGCATGCAGCCAACGAGGGCTACATGAACCGTCCTGGATCTGGTGGAGACCGTGATCGCACCAGGAGGATGTGGTTGTGGCTGCGCCGAGAAAGTTCGACCAAGAGACCCGTGAGCGGGCAGTTCGGATGTATGAGGACCGGATCGCGGAGTTCGGTGGTTCCAAGCGGGAAGCTCGTCGCCATGTGGGCGAGCTGCTGGGCATCAATGAGGCGACGTTGCGCAATTGGGTCGAGAACCGCCACGGTAGCGGGAGGCCTGCAGCGGGCGCGGTGATGTCTTCGGCAGGCGATAAGGACGCGGAGCTGGCCGCGCTGCGCAAGGAGAATGCTGAATTGCGCAGAGCCAACGAGATTCTCAAGACAGCATCGGCGTTTTTCGCCGCGGCGGAGGTCGACCGCCGACTGCGGTGA

Protein Sequence 

>Ms5096_MSMEG5096_protein
VAAPRKFDQETRERAVRMYEDRIAEFGGSKREARRHVGELLGINEATLRNWVENRHGSGRPAAGAVMSSAGDKDAELAALRKENAELRRANEILKTASAFFAAAEVDRRLR

Essentiality:

Call Condition Type Source Notes
Unknown in vitro CRISPRi [Bosch & DeJesus et al. (2021)]
Non Essential in vitro TnSeq [Dragset et al. (2019)]

You do not have permission to view notes.