MSMEG5212
ms5212
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M. smegmatis · MC2-155
[AlphaFold] [Orthologs] [UniProt] [MycoBrowser] [TnSeq DB] [SeqHub]
MC2-155 Coordinates: 5310644 – 5310811
Vulnerability Index (VI):
M. tuberculosis homologs
M. abscessus homologs MAB1590c
 +5   0  -5 -10 -15 sgRNA L2FC (+ATc/–ATc) TnSeq Gene Essentiality Predictions (1, 2) Essential Growth Defect Non-Essential Growth Advantage Unknown Operon Legend (3) Operon TSS Legend ? Ju, 2024 (5) Li, 2017 (4) (1) PMID: 28096490 (2) PMID: 31388080 (3) PMID: 26536359 (4) PMID: 29326668 (5) PMID: 38418874 MSMEG5210 MSMEG5211 MSMEG5212 MSMEG5213 MSMEG5214 MSMEG5215 MSMEG5216 MSMEG5217 MSMEG5218
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>ms5212_MSMEG5212_dna
GCTGCCAGCGTTCGACGGCCTGCCGGGCGTCGTTGAGCTGGACGCCGCGGTGGTGCGTGCCGGTCCACATGTCGAGCAGCTTGTCGCCGAGTTCGGCATGCCAGATGAGCGGCGGCAGATCGTCGATCGCGACTGTCATGCCCACGTGGTTGACCGGGGCGTTGGTCAACGTCCGGATCGCGCGGTCCGGGCCCGACGCGCCGCGGAACAGCCAGATGTCCCCGGTGCGGGTCTCGTCCAGCGCCTTGGTCAACGACACGGTGTTCGCATTCACGACCGCAGCTTAGGCACACTCTGTGCATGCGCAGCATCTGGAAGTGGGTCGGGTTGGCCGGTGTCGCCGGTGTCGTCGCCGGTGGTGTGTTGGTCGCGCGCGATCAGCGCCGCCGCAAGGCCTACACACCTGAGGACATCCGCGCGCGGCTGCATGAGCGGCTCGCGGAGGCGAACGGCGCCGACTCGGCCTGA

Protein Sequence 

>Ms5212_MSMEG5212_protein
MRSIWKWVGLAGVAGVVAGGVLVARDQRRRKAYTPEDIRARLHERLAEANGADSA

Essentiality:

Call Condition Type Source Notes
Unknown in vitro CRISPRi [Bosch & DeJesus et al. (2021)]
Non Essential in vitro TnSeq [Dragset et al. (2019)]

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