MSMEG5380
ms5380
-
M. smegmatis · MC2-155
[AlphaFold] [Orthologs] [Phyre2] [UniProt] [MycoBrowser] [TnSeq DB] [SeqHub]
MC2-155 Coordinates: 5458911 – 5458984
Vulnerability Index (VI):
M. tuberculosis homologs
M. abscessus homologs
background  +5   0  -5 -10 -15 sgRNA L2FC (+ATc/–ATc) TnSeq Gene Essentiality Predictions (1, 2) Essential Growth Defect Non-Essential Growth Advantage Unknown Operon Legend (3) Operon (1) PMID: 28096490 (2) PMID: 31388080 (3) PMID: 26536359 MSMEG5377 MSMEG5378 MSMEG5379 MSMEG5380 MSMEG5381
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>ms5380_MSMEG5380_dna
ATCTCTCCCTGCAAGGAGTCAGGAAGAGTCCCCAACATCGATTCGGAGGCAAGCTGACCAACCGCAACCCACGAGATGGACCGAGTGCTTTTCAGTTCGCCGGCTTATTGCTAACGGGAGTATTGACTACGAAGTAATTATTTGCAGGGTTTCCGATACTTTGCCCGTTTTCCGATCGCTGACATCGGCGCGGACGTGCCCGAGGACCCGGGGGCGGGCCGCCGTGCCATGTGGGCGCAGCCGCCAGTTGAGTCATCTGGGGACCGTCCGAAACGCATGAAGTAGCCTCTGAGCGGCGACGCCCCCATAGCCCAATTGGCAGAGGCAGCGGACTTAAAATCCGCCAAGTGTCGGTTCGAGTCCGACTGGGGGCA

Protein Sequence 

>Ms5380_MSMEG5380_protein

Essentiality:

Call Condition Type Source Notes
Unknown in vitro CRISPRi [Bosch & DeJesus et al. (2021)]
Unknown in vitro TnSeq [Dragset et al. (2019)]

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