sseC1
rv3118
hypothetical protein
M. tuberculosis · H37Rv
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H37Rv Coordinates: 3484806 – 3485108
Vulnerability Index (VI):
M. smegmatis homologs MSMEG5790
M. abscessus homologs MAB0739c
background  +5   0  -5 -10 -15 sgRNA L2FC (+ATc/–ATc) TnSeq Gene Essentiality Predictions (1, 2) Essential Growth Defect Non-Essential Growth Advantage Unknown Operon Legend (3) Operon (1) PMID: 28096490 (2) PMID: 31388080 (3) PMID: 26536359 Rv3115 moeB2 cysA3 sseC1 moaE1 Rv3120 cyp141 Rv3122
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>rv3118_sseC1_dna
GCCGCAGGAACAAAGCCAGCGGCCCGGACACATTCCTGGTGCCATCAACGTGCCGTGGAGCAGGGCCGCCAACGAGGACGGCACCTTCAAGTCCGATGAGGAGTTGGCCAAGCTTTACGCCGACGCCGGCCTAGACAACAGCAAGGAAACGATTGCCTACTGCCGAATCGGGGAACGGTCCTCGCACACCTGGTTCGTGTTGCGGGAATTACTCGGACACCAAAACGTCAAGAACTACGACGGCAGTTGGACAGAATACGGCTCCCTGGTGGGCGCCCCGATCGAGTTGGGAAGCTGATATGTGCTCTGGACCCAAGCAAGGACTGACATTGCCGGCCAGCGTCGACCTGGAAAAAGAAACGGTGATCACCGGCCGCGTAGTGGACGGTGACGGCCAGGCCGTGGGCGGCGCGTTCGTGCGGCTGCTGGACTCCTCCGACGAGTTCACCGCGGAGGTCGTCGCGTCGGCCACCGGCGATTTCCGGTTCTTCGCCGCGCCCGGATCCTGGACGCTGCGCGCGCTGTCGGCGGCCGGCAACGGCGACGCGGTGGTGCAGCCCTCGGGCGCGGGCATCCACGAGGTAGACGTCAAGATCACCTGA

Protein Sequence 

>Rv3118_SseC1_protein
MCSGPKQGLTLPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGDFRFFAAPGSWTLRALSAAGNGDAVVQPSGAGIHEVDVKIT

Essentiality:

Call Condition Type Source Notes
Growth Advantage in vitro TnSeq [DeJesus et al. (2017)]
Unknown in vitro CRISPRi [Bosch & DeJesus et al. (2021)]

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