MSMEG1035
ms1035
-
M. smegmatis · MC2-155
[AlphaFold] [Orthologs] [Phyre2] [UniProt] [MycoBrowser] [TnSeq DB] [SeqHub]
MC2-155 Coordinates: 1102979 – 1104559
Vulnerability Index (VI):
M. tuberculosis homologs
M. abscessus homologs MAB4836c, MAB1277
background  +5   0  -5 -10 -15 sgRNA L2FC (+ATc/–ATc) TnSeq Gene Essentiality Predictions (1, 2) Essential Growth Defect Non-Essential Growth Advantage Unknown Operon Legend (3) Operon (1) PMID: 28096490 (2) PMID: 31388080 (3) PMID: 26536359 MSMEG1031 MSMEG1032 nrdF2 MSMEG1034 MSMEG1035 MSMEG1037 MSMEG1038
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>ms1035_MSMEG1035_dna
GATGTCACGGCGTGGTTCGAGGTGCCCGCGGCGCAGCGCGGCGCGGGCCCCGACCCGGCCAATCCGGAAGGGCAGGACGTCGCCGCGGTCACGCTGTGCGATGCGGCCAGAGCGGTCTCCATCGACTGTTCGGTGATCACCGAACCGGGGCGGCATGACTGGGTTTTCGCCAACACCGCGTTCGCCAGGGCCCTGCCATGGCTGGCCGGCCAACTGCACACGCCTGGCGTCGCGGCTGTGCCGCTGCCGGCGTCTACGTTGGGGCAGCAGCCCACAAACGTCCGGGCGGCCCCGCGCTAGTGCTCGCGGGTGCGGCCGAGGCGTCACCGGGTGTGCTAACTGTTGACCATGCAGCCAACACAAAGTTCGGCCGCGCGATGACCACCACGACGACCGGGGCCGACATCGAAACGTCCCCGCCACGGTTCGCCCGGGCAGGGGTGGGCGCGGTCGCCGCGGTCAGCTCGATCGCCCTGCTGGTCTTCCTCGATCGTTATGGCTACTTCGGCGACGAGCTGTATTTCCTGTCCGCGGGGCGGCGACTGTCTTTCGGCTACGCAGACCAGGGGCCTGCCCTGCCGCTCATCGCCCACGTCCTCGATAGCGTCGCACCGGGCTCGCTGTTCGTGCTGCGCCTGCCGGCGGTCCTCGCCACCGCGGCGGCGATCGTGATCAGCGCCCAGATCGCCCGCGAATTCGGAGGTGGGCGAGGTGCGCAGCTGCTCGCCGCCGGCGGATACGCCACGTCACCGTTTCTGCTGGTCCAAGGCGGACAGCTGGCCACCAACTCGTTCGACATCCCGCTGTGGGTGTTGATCACCTGGCTGCTGGTGCGGTGGGCACGCACCCGCGACGACCGCCTGCTGCTGTGGGCCGCTGTCGCCACCGCGTTTGCCCTGCAGATCAAGTGGCTTGTCCCCATCCTGTGGATCTGCGTCGGGTTGAGCGTCCTGCTGGTGGGGCCACGAGAGTTGTTGCGCCGCAGATTCTTGTGGGTCGGTGCTGCCGGCGCCGCGCTCACCACGATACCGATGCTGGTGTGGCAGGCCGGCAATGGTTGGCCACAACTGGCGATGGGAAGCGTGATCGCGGCCGAAAACGACACGGTGGGCGGTCGGCCTGCGTTCGTGCCGCTCGCGTTGTTCATCGCCGGACTGCTCGGCGGTGTGCTGCTGCTGTGCGGGGTGTGGGCGCTGTTGCGCTGGGAACCGTTGCGGCCGTTCCGCTTTGTCGGGGTGACCGTGGTGCTGACGTTCGTGGTGTTCATGGTGCTCGGCGGGCGCGCGTACTACGTCGCCGGCGTCTATGCGGTGGCCATGGCGGCCGGCGCCGTCTGGCTCACCCGCGATGGACCGCGACGCCGGCGGAAGATCGTCGCGGTCCCGCTGATCGCGGCATCTGCGGCCTTGGCCGGGTGGAGCCTGCCGTGGCAGCCGGAGCGCGATATCCCGCCGGTGTCGGCCGACGACGGAATGGCCACCTTGACGTACGGCAGATTCGGCTGGCCGGAGCTCGCCGAAGAAACCGCCGCCGCCTACCGCGATCTCACCGACGAAGAACGAGAATGGGCTGTCGTGATCGCCGAGTCATATTGGCAGGCAAGCGCACTGGACAACTACCCAGACGGGGATCTGCCTGCCGTGTACAGCCCCGGCCGGGGTTGGGGATATTTCGGGGCGCCGCCCGACGACGCGACGACCGTGCTCTACGTCGACCGGTACCCCGATACGGCTCGCGAGTTGTGTGCGCACGTGGACCCGGTCGGCCGGGCCGACGCGCGCCTGGGGATCCCGGGGGTGAGCCGTGACGTGACGATATGGAAGTGTGTCGATCCACGACAGCCGTGGTCGACGATCTGGCCTTCCCTTCGGCGCCTGTAA

Protein Sequence 

>Ms1035_MSMEG1035_protein
VLAGAAEASPGVLTVDHAANTKFGRAMTTTTTGADIETSPPRFARAGVGAVAAVSSIALLVFLDRYGYFGDELYFLSAGRRLSFGYADQGPALPLIAHVLDSVAPGSLFVLRLPAVLATAAAIVISAQIAREFGGGRGAQLLAAGGYATSPFLLVQGGQLATNSFDIPLWVLITWLLVRWARTRDDRLLLWAAVATAFALQIKWLVPILWICVGLSVLLVGPRELLRRRFLWVGAAGAALTTIPMLVWQAGNGWPQLAMGSVIAAENDTVGGRPAFVPLALFIAGLLGGVLLLCGVWALLRWEPLRPFRFVGVTVVLTFVVFMVLGGRAYYVAGVYAVAMAAGAVWLTRDGPRRRRKIVAVPLIAASAALAGWSLPWQPERDIPPVSADDGMATLTYGRFGWPELAEETAAAYRDLTDEEREWAVVIAESYWQASALDNYPDGDLPAVYSPGRGWGYFGAPPDDATTVLYVDRYPDTARELCAHVDPVGRADARLGIPGVSRDVTIWKCVDPRQPWSTIWPSLRRL

Essentiality:

Call Condition Type Source Notes
Unknown in vitro CRISPRi [Bosch & DeJesus et al. (2021)]
Non Essential in vitro TnSeq [Dragset et al. (2019)]

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