MSMEG1038
ms1038
-
M. smegmatis · MC2-155
[AlphaFold] [Orthologs] [UniProt] [MycoBrowser] [TnSeq DB] [SeqHub]
MC2-155 Coordinates: 1107407 – 1107682
Vulnerability Index (VI):
M. tuberculosis homologs
M. abscessus homologs MAB3391
background  +5   0  -5 -10 -15 sgRNA L2FC (+ATc/–ATc) TnSeq Gene Essentiality Predictions (1, 2) Essential Growth Defect Non-Essential Growth Advantage Unknown Operon Legend (3) Operon (1) PMID: 28096490 (2) PMID: 31388080 (3) PMID: 26536359 MSMEG1035 MSMEG1037 MSMEG1038 MSMEG1039
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>ms1038_MSMEG1038_dna
GATCGTCCTGCCGCACAACGGTTCACCGACAAGCCCTATGAGGAGATCCCGGCCGACAGCGACGACTTCTCGATCGCCGACGCCGACATCGTCTACGTGTCGTTCGCCTCACCGGCCGCGCGGGACAAGGCCGACGCGGTCCTCAAGGGTGACGCCTGGCGGAAACTGTCGGCCAACCGCGACAACCGGGTGTTCGTCGTCAACAACGAGGTGTGGCAGACCGGGCAGAACATCGTGGCCGCTCGCGGGATCCTGGACGACCTGCGCTGGGTCAACGCACCGATCAACTAGTCTCACAGGGTGTTCCACGTCCTCACGCTCACGTACCTGAAACCGCTCGACGTCGTCGACCAGACCCGCCCCGCCCACGTGGCGTGGCTGAACGACGAGGTCGCCGCCGGACGCATCCTGCTGGCAGGCCGGCAGGAATCGCAGACCGGCGGTGTGCTGATCACCGGCGACATCAGCGTCGAGGACGCGCAGGCGCTCACCGAAGCCGATCCCTACTCGCAGGCCGGCCTGGTGAGCTACGAGCGCGTCTCGTTCAACGGTTCGATCCGCGCACCCGGTCTCTAG

Protein Sequence 

>Ms1038_MSMEG1038_protein
VFHVLTLTYLKPLDVVDQTRPAHVAWLNDEVAAGRILLAGRQESQTGGVLITGDISVEDAQALTEADPYSQAGLVSYERVSFNGSIRAPGL

Essentiality:

Call Condition Type Source Notes
Unknown in vitro CRISPRi [Bosch & DeJesus et al. (2021)]
Non Essential in vitro TnSeq [Dragset et al. (2019)]

You do not have permission to view notes.