MSMEG2301
ms2301
-
M. smegmatis · MC2-155
[AlphaFold] [Orthologs] [Phyre2] [UniProt] [MycoBrowser] [TnSeq DB] [SeqHub]
MC2-155 Coordinates: 2384537 – 2384956
Vulnerability Index (VI):
M. tuberculosis homologs
M. abscessus homologs MAB2869
background  +5   0  -5 -10 -15 sgRNA L2FC (+ATc/–ATc) TnSeq Gene Essentiality Predictions (1, 2) Essential Growth Defect Non-Essential Growth Advantage Unknown Operon Legend (3) Operon (1) PMID: 28096490 (2) PMID: 31388080 (3) PMID: 26536359 MSMEG2299 MSMEG2301 MSMEG2302 MSMEG2303 MSMEG2304 MSMEG2305 MSMEG2306
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>ms2301_MSMEG2301_dna
GTGGGCGCACTGTTCGTCCCTGCGGTCATCCCTGGCCTTTCGTTGTCGACGCGATCACGAGAGCGGTGTGCGCGTCACCGACGGCGCCGGTGTGGCGAGGCACACACGACGCAATTCCCCGAGGACAATAGCGAAACCGCGCTCAGAATTGAAACGTTTCATGGTTGTGGACGCGGCAAGCAAATTTCTGCGTGCGCCGAAGCTGTGAAACGCCTGTCAGGAAGGTGAAAGCCAGTGGGCGACTTGGCTACGGGACGCACTTTGCTCAAGCTGGGCACAAGGTCGACTAGGGTCGGCCGCATGGAACAGCGCATCAGCCTGATCACCCTCGGTGTCGACAACCTGGCAGCGTCCCGGCGGTTCTTCGAGGAGGGGCTGGGCTGGACCGCGACCGGCGCCTACGACGAGGTGGTGTTCTACCAACTGCCCGGCATCGCCCTGGCGCTGTTCGGCCGTGCCGATCTGGCCACCGACACCGGCGTCGCGGTCGACGGTCGGTTCAGCGGCATCAGCATCGCGATCAACCAGCGCACCGAGGCCGAGGTCGACGAGGTCATGACGCAGGTGCAGGCCGCGGGCGGCACGATCGTCAAACCGGCCGAAAAGACCTACTGGGGTGGCTATTCCGGCTACTTCACCGACCTCGACGGCCACGTGTGGGAGGTCGCGGTGAACCCGGCGTGGCTGATCAACGACGACGGATCGGTCACCATCCGGTAG

Protein Sequence 

>Ms2301_MSMEG2301_protein
MEQRISLITLGVDNLAASRRFFEEGLGWTATGAYDEVVFYQLPGIALALFGRADLATDTGVAVDGRFSGISIAINQRTEAEVDEVMTQVQAAGGTIVKPAEKTYWGGYSGYFTDLDGHVWEVAVNPAWLINDDGSVTIR

Essentiality:

Call Condition Type Source Notes
Unknown in vitro CRISPRi [Bosch & DeJesus et al. (2021)]
Non Essential in vitro TnSeq [Dragset et al. (2019)]

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