MSMEG2330
ms2330
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M. smegmatis · MC2-155
[AlphaFold] [Orthologs] [Phyre2] [UniProt] [MycoBrowser] [TnSeq DB] [SeqHub]
MC2-155 Coordinates: 2411359 – 2412522
Vulnerability Index (VI):
M. tuberculosis homologs Rv3037c
M. abscessus homologs MAB3380c
background  +5   0  -5 -10 -15 sgRNA L2FC (+ATc/–ATc) TnSeq Gene Essentiality Predictions (1, 2) Essential Growth Defect Non-Essential Growth Advantage Unknown Operon Legend (3) Operon (1) PMID: 28096490 (2) PMID: 31388080 (3) PMID: 26536359 MSMEG2326 MSMEG2327 MSMEG2328 MSMEG2329 MSMEG2330 MSMEG2331 MSMEG2332 MSMEG2333 MSMEG2334
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>ms2330_MSMEG2330_dna
GCCGTCGTCGACCTGCACACGTTCGATCCGGCGGACCTGGAGCGCATGGCCACCAACGCCGGTGCGGTCGAGGTGCGCACCGCCAGCGAGGAATTCACCGCCGCCATGCTGGGCTGGCCGGTCCGCACGTTCGAGGCCGCGGTGCCGCCGGGCCGTCTGGGCTGGGGCTGGGCCAAGTTCGCGTTCAACAGCTGGACCACGCTGAGCTGGGTGGACGCCAACGTCTGGCGCAAGGTCGTGCCGAAGGGCTGGTTCTACAACGTCATGGTCACGGGGGTCAAACCCTCCTGAGCCCTGGGGTGACCTTCACGGTCGACGACGTCGCGTATCTGCGCTCGGCGGCAGGCAGGCAGGCGCTCGACGAGGCCGGGAAACTGGCCCTGTCGGGCGCCCGTCTGGTCAACGACATCGCCGCGCTGCGAGCGGCTTTCGGTGACCGGGCGGCCGTGCTGGCCGAGACCGTGCAGTTGCGCCGCCGCGCCGCGGCCAAGTTCGCCGACCCGTCGGACTGGCTGTTCACCGACGAAGCGTTGCAGCAGGCCACCGCGGCGCCGGTCGCGGCACACCGGGCCGCGCGACTCGCGGGTGCGACGGTTCACGATGCCACCTGCTCGATCGGCGGTGAGCTTGTCGCGCTTCGTGATTCGGCTGACCATGTGGTGGGCAGTGACCTGGATCCGGTGCGGGTGGCGATGGCCGCGGGCAACGTGCCCGACGTCGAGGTGTGCCGTGCCGACGCGCTGCGGCCCATCACGCGCGACGCCGTCGTGATCCTGGACCCCGCGCGGCGTGCGGGCGGCAGGCGGCGGTTCGACCCGCGTGCCTACACCCCGGCCCTCGACGCGGTGTTCGACGTGTACCGGGATCGCGACATGGTCGTGAAATGCGCTCCCGGAATCGATTTCGCCGAGATCGAACGCATGGGGTTCACCGGTGAGATCGAGGTGACCTCGGTGGGCGGGGGAGTGCGAGAGGCGTGCCTGTGGTCACCGGCGCTCGCCGGTGCCGGGGTGAGAAGGCGGGCCACCGTGCTGGACCGCGGCGAGCAGATCACCGACACCGAACCCGACGACTGCGCCGTCGCACCCGCCGGTCGGTGGATCGTCGACCCCGACGGGGCCGTCGTACGCGCAGGCCTGGTGCGCCACTACGCGGCCAGGCACGGGCTGTGGCAACTCGACCCCGACATCGCGTACCTCTCCGGTGACCGGTTGCCCGACGGGGTCCGCGGATTCGAGGTGCTCGAGGAGCTCGGCTACCACGAACGGCGTTTGCGGGCGGCACTTGCGGCACGGTCCGCCGGTGCGGTAGAGATACTGGTCCGCGGGGTCAATGTGGATCCCGACGTACTGCGAACGCGGTTACGGCTGCGCGGATCCAAGCAACTCACGGTGGTCATCACGCGGCTGGGGTCGGGATCGGCGAGCCGGGCGACGGCGTACATTTGCCGTCCCTCGCGATGA

Protein Sequence 

>Ms2330_MSMEG2330_protein
VTFTVDDVAYLRSAAGRQALDEAGKLALSGARLVNDIAALRAAFGDRAAVLAETVQLRRRAAAKFADPSDWLFTDEALQQATAAPVAAHRAARLAGATVHDATCSIGGELVALRDSADHVVGSDLDPVRVAMAAGNVPDVEVCRADALRPITRDAVVILDPARRAGGRRRFDPRAYTPALDAVFDVYRDRDMVVKCAPGIDFAEIERMGFTGEIEVTSVGGGVREACLWSPALAGAGVRRRATVLDRGEQITDTEPDDCAVAPAGRWIVDPDGAVVRAGLVRHYAARHGLWQLDPDIAYLSGDRLPDGVRGFEVLEELGYHERRLRAALAARSAGAVEILVRGVNVDPDVLRTRLRLRGSKQLTVVITRLGSGSASRATAYICRPSR

Essentiality:

Call Condition Type Source Notes
Unknown in vitro CRISPRi [Bosch & DeJesus et al. (2021)]
Non Essential in vitro TnSeq [Dragset et al. (2019)]

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