MSMEG1021
ms1021
-
M. smegmatis · MC2-155
[AlphaFold] [Orthologs] [Phyre2] [UniProt] [MycoBrowser] [TnSeq DB] [SeqHub]
MC2-155 Coordinates: 1091275 – 1091694
Vulnerability Index (VI):
M. tuberculosis homologs
M. abscessus homologs MAB2869
background  +5   0  -5 -10 -15 sgRNA L2FC (+ATc/–ATc) TnSeq Gene Essentiality Predictions (1, 2) Essential Growth Defect Non-Essential Growth Advantage Unknown Operon Legend (3) Operon (1) PMID: 28096490 (2) PMID: 31388080 (3) PMID: 26536359 MSMEG1019 MSMEG1021 MSMEG1022 MSMEG1023 MSMEG1024 MSMEG1025 MSMEG1026
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>ms1021_MSMEG1021_dna
GTGGGCGCACTGTTCGTCCCTGCGGTCATCCCTGGCCTTTCGTTGTCGACGCGATCACGAGAGCGGTGTGCGCGTCACCGACGGCGCCGGTGTGGCGAGGCACACACGACGCAATTCCCCGAGGACAATAGCGAAACCGCGCTCAGAATTGAAACGTTTCATGGTTGTGGACGCGGCAAGCAAATTTCTGCGTGCGCCGAAGCTGTGAAACGCCTGTCAGGAAGGTGAAAGCCAGTGGGCGACTTGGCTACGGGACGCACTTTGCTCAAGCTGGGCACAAGGTCGACTAGGGTCGGCCGCATGGAACAGCGCATCAGCCTGATCACCCTCGGTGTCGACAACCTGGCAGCGTCCCGGCGGTTCTTCGAGGAGGGGCTGGGCTGGACCGCGACCGGCGCCTACGACGAGGTGGTGTTCTACCAACTGCCCGGCATCGCCCTGGCGCTGTTCGGCCGTGCCGATCTGGCCACCGACACCGGCGTCGCGGTCGACGGTCGGTTCAGCGGCATCAGCATCGCGATCAACCAGCGCACCGAGGCCGAGGTCGACGAGGTCATGACGCAGGTGCAGGCCGCGGGCGGCACGATCGTCAAACCGGCCGAAAAGACCTACTGGGGTGGCTATTCCGGCTACTTCACCGACCTCGACGGCCACGTGTGGGAGGTCGCGGTGAACCCGGCGTGGCTGATCAACGACGACGGATCGGTCACCATCCGGTAG

Protein Sequence 

>Ms1021_MSMEG1021_protein
MEQRISLITLGVDNLAASRRFFEEGLGWTATGAYDEVVFYQLPGIALALFGRADLATDTGVAVDGRFSGISIAINQRTEAEVDEVMTQVQAAGGTIVKPAEKTYWGGYSGYFTDLDGHVWEVAVNPAWLINDDGSVTIR

Essentiality:

Call Condition Type Source Notes
Unknown in vitro CRISPRi [Bosch & DeJesus et al. (2021)]
Non Essential in vitro TnSeq [Dragset et al. (2019)]

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