MSMEG1029
ms1029
-
M. smegmatis · MC2-155
[AlphaFold] [Orthologs] [Phyre2] [UniProt] [MycoBrowser] [TnSeq DB] [SeqHub]
MC2-155 Coordinates: 1097374 – 1098111
Vulnerability Index (VI):
M. tuberculosis homologs Rv3050c, Rv0472c, Rv0302
M. abscessus homologs MAB2968, MAB2812, MAB4026c
background  +5   0  -5 -10 -15 sgRNA L2FC (+ATc/–ATc) TnSeq Gene Essentiality Predictions (1, 2) Essential Growth Defect Non-Essential Growth Advantage Unknown Operon Legend (3) Operon (1) PMID: 28096490 (2) PMID: 31388080 (3) PMID: 26536359 MSMEG1025 MSMEG1026 MSMEG1027 MSMEG1028 MSMEG1029 MSMEG1030 MSMEG1031 MSMEG1032 nrdF2
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>ms1029_MSMEG1029_dna
GCGGTCAGTCCGTCGCCGCACGGCTTGTCGCGGGGGAACTCCGCTTTGTCCAGGACGACCACTTTGGCGCCGGTCTGTGCGGCCTGCCATGCCGCTGCCGACCCCGATGGGCCGCCACCAGCAATGACCAGGTCGTATCGCTGCGTCATGAGCCTCGTCTCGTTGATTGAGTGTCGCTGAAATAGTACCCAAGCCCGCACGCGCCAGTGTGGCGGGAAAACAACCGGCCACCGGGGGTGATCGCGTGTTGGTGTGCGGTCTGAGCAGGTCAGCACTATCAGGGCGAGTACAGTAATCGCGTGCGGCGAGGGTCGAGATCACATTCCGGCGGTCCGGGGGTCAAGGTTGACGCCCGCAGTGAGCGCTGGCGTGAGCACCGTAAAAAGGTGCGCTCGGAGATCGTCGACGCCGCGTTCCGTGCGATCGACCGGCTGGGCCCCGAGCTGAGTTTGCGCGAGATCGCCGAAGAGGCCGGCACCGCCAAACCCAAGATCTACCGTCACTTCACCGACAAGTCGGACCTGTTCCAGGCGATCGGCGAGCGGTTGCGCGACATGCTGTGGTCGGCGATCTTCCCGTCGATCAACCTCGCCTCCGATCCGGCCCGCGAGGTGATCCGTCGCAGCGTCGAACAGTACGTGCGATTGGTCGACGAACATCCCAACGTACTGCGGTTCCTCATCCAGGGGCGGTTCGCCGAGCAGAGCGAGTCGACCATGCGCGCGCTCAACGAGGGCCGCGGCATCACGCTCGCGATGGCCGACATGTTCTCCCACGAACTTCGCGAGATGGAACTCGACGGCGCCGCCATCGAACTGGCCGCGTTCGCGACGTTCGGCGCGGCCGCGTCGGCCACGGACTGGTGGCTGGGCAGTAAAGAGGACAGCCCGCGCCGCATGCCCGCAGACGAGTTCGTCAACCACCTGACCACGATCATGGTCGGCTCCATCAACGGCACCTGCGAGCTGCTGGGCATCCGGATCGACCCGGATCTGCCCCTGCACGAGGGTGTGCAGCGCCGCGAACGCGCCAGTTAG

Protein Sequence 

>Ms1029_MSMEG1029_protein
VRRGSRSHSGGPGVKVDARSERWREHRKKVRSEIVDAAFRAIDRLGPELSLREIAEEAGTAKPKIYRHFTDKSDLFQAIGERLRDMLWSAIFPSINLASDPAREVIRRSVEQYVRLVDEHPNVLRFLIQGRFAEQSESTMRALNEGRGITLAMADMFSHELREMELDGAAIELAAFATFGAAASATDWWLGSKEDSPRRMPADEFVNHLTTIMVGSINGTCELLGIRIDPDLPLHEGVQRRERAS

Essentiality:

Call Condition Type Source Notes
Unknown in vitro CRISPRi [Bosch & DeJesus et al. (2021)]
Growth Advantage in vitro TnSeq [Dragset et al. (2019)]

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