MSMEG1042
ms1042
-
M. smegmatis · MC2-155
[AlphaFold] [Orthologs] [Phyre2] [UniProt] [MycoBrowser] [TnSeq DB] [SeqHub]
MC2-155 Coordinates: 1112116 – 1112409
Vulnerability Index (VI):
M. tuberculosis homologs
M. abscessus homologs
background  +5   0  -5 -10 -15 sgRNA L2FC (+ATc/–ATc) TnSeq Gene Essentiality Predictions (1, 2) Essential Growth Defect Non-Essential Growth Advantage Unknown Operon Legend (3) Operon (1) PMID: 28096490 (2) PMID: 31388080 (3) PMID: 26536359 serB MSMEG1042 MSMEG1043 MSMEG1044 MSMEG1045 MSMEG1046
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>ms1042_MSMEG1042_dna
CCTCGGGGTGGCGTTCAACGCCAAACCCGCGCTGCGTGAGGTGGCCGACGCGTCACTGAGCCATCCGTACCTGGACACCGTGCTGTTCATCCTGGGCATCACGCGCGGCGAGATCGAGGCCGCCGATGCGCTCGACGGTGTGGTGCGCCGCGTCGAGATCCCGGATTATTAGCCGAGATTCGCTTTTCTTTTGCTGACGGTGCGCGTGCGCGCTGATGGCGCGGCTTCGGTGGTTTGCGGGTTCGATGAACGCCCTTGCGCGTGCCGTGACCGTCGCAGCGGTGCCGTAGGGTGAGTTCGTGATGACGGTGAAGCATGCGGTCGTGATCGGCGCGTTCGCAGTCGCGGCGGTCGCCGGACAACTGGCGGTCGCGGCTCCAGCCGAGGCCAAACGGTGCCCGGCGGGCACCGTGGAGAAGTTCGAGGGCGTGTGCATCAAAGGCTCGGGCGGCGGCAGCGTGGCGCCTCCGGTGATGGCGCCCAGCGCGGGCGGCGCGAAAATCCAGAACCTGCCGGGCCAGTTGCCGAGCGTCAACGGCGTGCCGTGCACCATCGAGCACTACGGCACGTGCCTCGCGATGACCCAGCCCTAG

Protein Sequence 

>Ms1042_MSMEG1042_protein
VMTVKHAVVIGAFAVAAVAGQLAVAAPAEAKRCPAGTVEKFEGVCIKGSGGGSVAPPVMAPSAGGAKIQNLPGQLPSVNGVPCTIEHYGTCLAMTQP

Essentiality:

Call Condition Type Source Notes
Unknown in vitro CRISPRi [Bosch & DeJesus et al. (2021)]
Non Essential in vitro TnSeq [Dragset et al. (2019)]

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