MSMEG1045
ms1045
-
M. smegmatis · MC2-155
[AlphaFold] [Orthologs] [Phyre2] [UniProt] [MycoBrowser] [TnSeq DB] [SeqHub]
MC2-155 Coordinates: 1114057 – 1114752
Vulnerability Index (VI):
M. tuberculosis homologs
M. abscessus homologs MAB3386c
background  +5   0  -5 -10 -15 sgRNA L2FC (+ATc/–ATc) TnSeq Gene Essentiality Predictions (1, 2) Essential Growth Defect Non-Essential Growth Advantage Unknown Operon Legend (3) Operon (1) PMID: 28096490 (2) PMID: 31388080 (3) PMID: 26536359 serB MSMEG1042 MSMEG1043 MSMEG1044 MSMEG1045 MSMEG1046 MSMEG1047 MSMEG1048 MSMEG1049
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>ms1045_MSMEG1045_dna
CGCCGGTCCAGTTTGACTGGACGTCCGCCAGTTGCCGAGTTCGCGCGCCAAAAGGTCCACATCCAGCGACCGGGCGACCATGGGGCTACTCATAATGAGGCCAGTATCCGCCGACTGGCTATTGATGAGCAAGCCAGATCTCAAGATCATGGGTATATGCGTAAGAATTGGCTTTCTCGACTGTCGGTCAAATATCGCCGCGCCTATCAACCGCACCCCCGCACGAGTGCCCGTGACGCGGATGCCCGCCGCGTGCACAGCGAACTCGACGCCATCCGCGCGCGATTCCCCGATCACGCGTGAGGACCGCGTTGACGCGCGGTGCGCTGCTTTCCGTCGGACTCGTCGGCTACGGCACGTCGATGGCCATGATGGTCCGCGCCGGCCTCGGCCTTGACCCGTGGGACGTCTTCCACCAGGGACTCACCCGCCACACCCCGATGACCATCGGTATGGCGTCGGCCGTGGTGGGCGTCGTGGTGCTGCTGGCCTGGATCCCGCTGCGCAACCGGCCCGGCATCGGCACCGTCGCCAACGTCATCGTGATCGCGGTGACCGTCGACGCGGTGCTCGCGATGCTGCCCGCACCGACGGCGATGCCGGTACGTATCGCGATGATGGTGGGCGCGGTGGTGCTCAACGCGATCAGCACCGTGCTCTACATCGGCGCCGGTCTCGGTCCCGGGCCGCGCGACGGCCTGATGACCGGCCTCGTGGCGCGTACCGGGCTGTCGGTGCGACTCGTCCGCACGTGCATCGAGGCCACCGTGCTGGCCGTCGGATGGCTCATGGGCGGGACCGTCGGTGTGGGAACGGTCCTGTACGCCTTCGGGATCGGCCCGCTGGTGCAGTTGTTCCTCAGACTCACCCCGCGCCGCATCCTGTTCCACGATTTCGGCGCGCCCGGGCGTAACCGGGCGAGCGGCGAGGACATCACTACGATGAGCGGGTGCCCACAACCGGAGAAGACGCAGCCGACAACCCAGACCTGCTGA

Protein Sequence 

>Ms1045_MSMEG1045_protein
VRTALTRGALLSVGLVGYGTSMAMMVRAGLGLDPWDVFHQGLTRHTPMTIGMASAVVGVVVLLAWIPLRNRPGIGTVANVIVIAVTVDAVLAMLPAPTAMPVRIAMMVGAVVLNAISTVLYIGAGLGPGPRDGLMTGLVARTGLSVRLVRTCIEATVLAVGWLMGGTVGVGTVLYAFGIGPLVQLFLRLTPRRILFHDFGAPGRNRASGEDITTMSGCPQPEKTQPTTQTC

Essentiality:

Call Condition Type Source Notes
Unknown in vitro CRISPRi [Bosch & DeJesus et al. (2021)]
Non Essential in vitro TnSeq [Dragset et al. (2019)]

You do not have permission to view notes.