MSMEG1054
ms1054
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M. smegmatis · MC2-155
[AlphaFold] [Orthologs] [Phyre2] [UniProt] [MycoBrowser] [TnSeq DB] [SeqHub]
MC2-155 Coordinates: 1121617 – 1121739
Vulnerability Index (VI):
M. tuberculosis homologs
M. abscessus homologs
background  +5   0  -5 -10 -15 sgRNA L2FC (+ATc/–ATc) TnSeq Gene Essentiality Predictions (1, 2) Essential Growth Defect Non-Essential Growth Advantage Unknown Operon Legend (3) Operon (1) PMID: 28096490 (2) PMID: 31388080 (3) PMID: 26536359 MSMEG1050 MSMEG1051 MSMEG1052 MSMEG1053 MSMEG1054 MSMEG1055 fni
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>ms1054_MSMEG1054_dna
GCCACGGCCCACATCCAGAACATGGCGCCCGGGCCGCCGAACGCGATCGCGGTCGCGACCCCGGCGATGTTGCCGGTACCGACGCGGCCCGCCAGCGACATCGTCAGCGCCTGGAACGACGAGACCCCGGAAGGCGACTTCTCGCCTTTGACCATCAGCCGGATCATCTCCGGTACCTGCCGGATCTGCAGGAGCCTGGTGCGGATCGAGAAGTACACGCCCGCAGCCAGACACAGATAGACGAGCCAGCTACTCCATACGTAGCTGTTGATGAGGTCGAGAAACTCCGACACTGGTTATTGCCTTCCCCCAGAAATTCATTGATCTTGCACGGTTGCCGCGCCAAATCCTCACACGAAGCCCACCACTTTCTGTGGAGATTTCGTCAATTCCCTGTAAAACTTCCGGCATCATGCCGGTGA

Protein Sequence 

>Ms1054_MSMEG1054_protein
LPSPRNSLILHGCRAKSSHEAHHFLWRFRQFPVKLPASCR

Essentiality:

Call Condition Type Source Notes
Unknown in vitro CRISPRi [Bosch & DeJesus et al. (2021)]
Growth Advantage in vitro TnSeq [Dragset et al. (2019)]

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