MSMEG1055
ms1055
-
M. smegmatis · MC2-155
[AlphaFold] [Orthologs] [Phyre2] [UniProt] [MycoBrowser] [TnSeq DB] [SeqHub]
MC2-155 Coordinates: 1123108 – 1123851
Vulnerability Index (VI):
M. tuberculosis homologs Rv3034c
M. abscessus homologs MAB3378c
background  +5   0  -5 -10 -15 sgRNA L2FC (+ATc/–ATc) TnSeq Gene Essentiality Predictions (1, 2) Essential Growth Defect Non-Essential Growth Advantage Unknown Operon Legend (3) Operon (1) PMID: 28096490 (2) PMID: 31388080 (3) PMID: 26536359 MSMEG1052 MSMEG1053 MSMEG1054 MSMEG1055 fni MSMEG1058 MSMEG1059
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>ms1055_MSMEG1055_dna
TCACCTTTGGCCGACCGGCTCCACTCCGCGCGCAGCGACTGGGCTCCGGGAGCACTTTTGTAGCTGCTGTTGGCGGCGTCGGCGTATTGCGCGGCCCAACCGGAGGCAGGGCTGGCCTGGACCCAGGAATCGGTGTTCTCACAACCGGCGAGAAGGCCCGTGAGCAGCGCAGCCACCATGAGCGCCAGGTATCGCCGGAACACGGTGTCCTTTCGTCGAGAGACCGGACAGATCGTTGAGTTGTGGACCACGTGAGGGTAACCCGAGCGCCCGGAAAGCCTCGCGTAGGCTTTCCGGCCATGACGACGATGTGGGGCGCACCGATTCACAAGCGGTGGCGGGGCTCGCGTCTGCGCGATCCGCGTCAAGCCGACTTCCTGACCATGGCGTCGCTGAAGTGGGTCATCGCCAACCGGGCGTTCACGCCCTGGTACCTGGTGCGGTACTGGCGGCTGCTCAAGTTCAAGCTGGCCAACCCGCACATCATCACCCGCGGCATGGTGTTCCTGGGCAAGGACGTGGAGATCCAGTGCACGCCCGAACTCGCGCAGATGGAGATCGGCCGCTGGGTGCACATCGGTGACAAGAACACCATCCGCTGCCACGAGGGCTCGCTGCGCATCGGCGACAAGGTGGTGCTGGGCCGCGACAACGTCATCAACACCTACCTCGACATCGAGCTCGGTGACTCGGTGCTCATGGCCGACTGGTGCTACGTCTGCGACTTCGACCACAAGATGGACGACATCAACGTCCCCATCAAGGATCAGGGCATCATCAAGGGCCCGGTGCGTATCGGGCCCGACACCTGGATCGCCGCCAAGGTCACCATTCTGCGCAACACCCTGATCGGCCGCGGTTGCGTGCTCGGCGCCCACGCCGTGGTCAAGGGGGACATCCCGGACCACTCGATCGCGGTCGGCGCACCCGCCAAGGTGGTCAAGAACCGCAAGCTGGCGTGGGAGACGTCGGCGGCCGAGCGCGCCGAACTCGCCGCTGCACTCGCCGACATCGAGCGCAAGAAGGCCGTGAGCAACAAGTAG

Protein Sequence 

>Ms1055_MSMEG1055_protein
MTTMWGAPIHKRWRGSRLRDPRQADFLTMASLKWVIANRAFTPWYLVRYWRLLKFKLANPHIITRGMVFLGKDVEIQCTPELAQMEIGRWVHIGDKNTIRCHEGSLRIGDKVVLGRDNVINTYLDIELGDSVLMADWCYVCDFDHKMDDINVPIKDQGIIKGPVRIGPDTWIAAKVTILRNTLIGRGCVLGAHAVVKGDIPDHSIAVGAPAKVVKNRKLAWETSAAERAELAAALADIERKKAVSNK

Essentiality:

Call Condition Type Source Notes
Unknown in vitro CRISPRi [Bosch & DeJesus et al. (2021)]
Growth Advantage in vitro TnSeq [Dragset et al. (2019)]

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