MSMEG1052
ms1052
-
M. smegmatis · MC2-155
[AlphaFold] [Orthologs] [Phyre2] [UniProt] [MycoBrowser] [TnSeq DB] [SeqHub]
MC2-155 Coordinates: 1120066 – 1121610
Vulnerability Index (VI):
M. tuberculosis homologs
M. abscessus homologs
background  +5   0  -5 -10 -15 sgRNA L2FC (+ATc/–ATc) TnSeq Gene Essentiality Predictions (1, 2) Essential Growth Defect Non-Essential Growth Advantage Unknown Operon Legend (3) Operon (1) PMID: 28096490 (2) PMID: 31388080 (3) PMID: 26536359 MSMEG1048 MSMEG1049 MSMEG1050 MSMEG1051 MSMEG1052 MSMEG1053 MSMEG1054 MSMEG1055
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>ms1052_MSMEG1052_dna
GTGGCGCGGCAGGGCGGCCACGGGCAGGCCCTGCTGGTCTTCGACACCGGTGACGGCCGCACGCTGCAGACCCATCCGCTTCCCGAGGCCACCGGCTGGCCGGTCGGGGTATCGATCGGCCACGACGGCCGCGTGGTCACCGCGACGAGTGACGGGCAAGTGTATGGCTTCTCACCGGCATGATGCCGGAAGTTTTACAGGGAATTGACGAAATCTCCACAGAAAGTGGTGGGCTTCGTGTGAGGATTTGGCGCGGCAACCGTGCAAGATCAATGAATTTCTGGGGGAAGGCAATAACCAGTGTCGGAGTTTCTCGACCTCATCAACAGCTACGTATGGAGTAGCTGGCTCGTCTATCTGTGTCTGGCTGCGGGCGTGTACTTCTCGATCCGCACCAGGCTCCTGCAGATCCGGCAGGTACCGGAGATGATCCGGCTGATGGTCAAAGGCGAGAAGTCGCCTTCCGGGGTCTCGTCGTTCCAGGCGCTGACGATGTCGCTGGCGGGCCGCGTCGGTACCGGCAACATCGCCGGGGTCGCGACCGCGATCGCGTTCGGCGGCCCGGGCGCCATGTTCTGGATGTGGGCCGTGGCATTCCTCGGCGCGTCCACGTCGTTCGTGGAATGCACCCTGGGCCAGATCTACAAGGCCCGTGACCAGCTGACCGGTGAGTACCGTGGCGGTCCGGCCTACTATCTGAGCCGCGCTCTCGAGCACACACGCGCGGCCGGTGTCTTCAAGGTGTACGGACTGCTGTTCGCGGCCGTCACGGTGCTCGCGTGTGGTCTGCTGCTGCCCAGCGTGCAGTCGAACTCGATGGCCGCCGCGATGAACTCGGCGTGGGGCTTCTCCACCTGGTGGGTGGGCGTCGGCATCGTGATCGTGCTGGCCTTCGTGATCATCGGCGGCGTCAAGCGCATCGCGGCGTTCGCCTCGATCGTCGTGCCGTTCATGGCCGTCGTCTACATCGTCCTCGCGCTGATCATCGTCGTGGTGAACGTCAGCGCGGTGCCCGAGGTGTTGCGACTGATCTTCGCGAGCGCGTTCGGCCTGGACTCGGCGTTCGGCGCGATCATCGGTTCGGCCGTGATGTGGGGCGTCAAGCGCGGCATCTACTCCAACGAGGCCGGCCAGGGCACGGGCCCGCACGCCGCCGCCGCGGCCGAGGTCACCCACCCCGCCAAGCAGGGTCTGGTGCAGGCGTTCGCGGTGTACATCGACACGCTGTTCGTCTGCTCGGCCACGGGCTTCCTGATCCTCACGACGGGCGCCTACCGCGTCTACGAAGGTGAGAGCGAGACGGGTGCGGTGCTGGCCGAGGGCGGCATGCTGCCGTCGGATATCACGGTGGGGCCCGCCTTCGCACAGGCCGGTTTCGACACGTTGTGGAGCGGCGCCGGTGCGTCGTTCGTCGCGGTGTCGCTCGCGTTCTTCGCGTTCACCACGATCGTCGCGTACTACTACATGGCCGAGACGAACCTGCGCTTCCTGCTGGGCAAGAGCGCGACCATCCCGGTTCCGATCGTCCGCGGCACCGTCGGTTCCAATGCCACGATGCTGCTGCAGGCGCTGATCCTGGTGTCGGTGGTCACCGGCGCGATCTCCACCGCAACCGACGCCTGGACTCTCGGCGACATCGGTGTGGGATTGATGGCCTGGCTCAACATCATCGGCATCATCATCCTGCAGCGGCCCGCACTCGCGGCGCTCAAGGACTACGAGAAACAGCAGAAGGCGGGCATCGACCCGGTCTTCAACCCGCTGAGCCTCGACATCGTCGGTGCGACGTTCTGGGAGACCTACGACCCCAAGGGCAGGCACGAACGGACCACGACGTCCGCGTGA

Protein Sequence 

>Ms1052_MSMEG1052_protein
VSEFLDLINSYVWSSWLVYLCLAAGVYFSIRTRLLQIRQVPEMIRLMVKGEKSPSGVSSFQALTMSLAGRVGTGNIAGVATAIAFGGPGAMFWMWAVAFLGASTSFVECTLGQIYKARDQLTGEYRGGPAYYLSRALEHTRAAGVFKVYGLLFAAVTVLACGLLLPSVQSNSMAAAMNSAWGFSTWWVGVGIVIVLAFVIIGGVKRIAAFASIVVPFMAVVYIVLALIIVVVNVSAVPEVLRLIFASAFGLDSAFGAIIGSAVMWGVKRGIYSNEAGQGTGPHAAAAAEVTHPAKQGLVQAFAVYIDTLFVCSATGFLILTTGAYRVYEGESETGAVLAEGGMLPSDITVGPAFAQAGFDTLWSGAGASFVAVSLAFFAFTTIVAYYYMAETNLRFLLGKSATIPVPIVRGTVGSNATMLLQALILVSVVTGAISTATDAWTLGDIGVGLMAWLNIIGIIILQRPALAALKDYEKQQKAGIDPVFNPLSLDIVGATFWETYDPKGRHERTTTSA

Essentiality:

Call Condition Type Source Notes
Unknown in vitro CRISPRi [Bosch & DeJesus et al. (2021)]
Growth Advantage in vitro TnSeq [Dragset et al. (2019)]

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