MSMEG2308
ms2308
-
M. smegmatis · MC2-155
[AlphaFold] [Orthologs] [Phyre2] [UniProt] [MycoBrowser] [TnSeq DB] [SeqHub]
MC2-155 Coordinates: 2389298 – 2390485
Vulnerability Index (VI):
M. tuberculosis homologs Rv0561c
M. abscessus homologs MAB3406, MAB3929
background  +5   0  -5 -10 -15 sgRNA L2FC (+ATc/–ATc) TnSeq Gene Essentiality Predictions (1, 2) Essential Growth Defect Non-Essential Growth Advantage Unknown Operon Legend (3) Operon (1) PMID: 28096490 (2) PMID: 31388080 (3) PMID: 26536359 MSMEG2303 MSMEG2304 MSMEG2305 MSMEG2306 MSMEG2307 MSMEG2308 MSMEG2309 MSMEG2310 MSMEG2311
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>ms2308_MSMEG2308_dna
ACTCAGCTCGGGGCCCAGCCGGTCGATCGCACGGAACGCGGCGTCGACGATCTCCGAGCGCACCTTTTTACGGTGCTCACGCCAGCGCTCACTGCGGGCGTCAACCTTGACCCCCGGACCGCCGGAATGTGATCTCGACCCTCGCCGCACGCGATTACTGTACTCGCCCTGATAGTGCTGACCTGCTCAGACCGCACACCAACACGCGATCACCCCCGGTGGCCGGTTGTTTTCCCGCCACACTGGCGCGTGCGGGCTTGGGTACTATTTCAGCGACACTCAATCAACGAGACGAGGCTCATGACGCAGCGATACGACCTGGTCATTGCTGGTGGCGGCCCATCGGGGTCGGCAGCGGCATGGCAGGCCGCACAGACCGGCGCCAAAGTGGTCGTCCTGGACAAAGCGGAGTTCCCCCGCGACAAGCCGTGCGGCGACGGACTGACCGCACGCGCGGTGAGCTACCTGCAGAAGATGGGACTGGCCGACGAGGTCGCCACCTATCACCGGGTCAACCGTGTGACGGTCTTCAGCCCCAGCGAATGGGAGCTGTCGTTCCCGCGCAGGCCCGGGATGCCCGACCACGGCCACACCGTCAGCCGGACCCACCTCGACACGGTGCTGCTCAAGCACGCCGAGTCCGCGGGTGCCGAGGTACGCCAGGGCGCCGAGGTGGCCGGACCCGAGTTCGACGCCAACGGCCGCGTGATCGGCGTGGTGCTCAAGAGCGGTGAGAAGGTGTACGGCGACGCGGTGATCGCGGCCGACGGCGCCTACTCACCGATCAAGCGCGCGCTCAAGATCGACTCGGAGTACAACGGCTACTCCGCGATCGCGATCCGCTCCGAGATGCATGCCAACCGGCCGGACTCCGACAGCCTGGACATCTACCTCAAGCTGGTGTTCCAAGGGGATCAGCTGCCCGGCTACGGCTGGGTGTTCCCGATGGGCAACGGCATGTTCAACATCGGGCTGGGCTACGTCAACAGCTACAAGAACTGGCAGTCGATCAACGCGACGCAGTTCCTCGGCGAGTTCCTGCGCTCGCTTCCGCGCGAGTGGGAGCTGCCGCCCATCGAGGAACTCAAGAAGAACAAGAGCGTGCGCGCATGGCGATTGCCCATGGGCTTCACGGCGTGGCCGCCGTGGCGTCCGGGCGTGCTGTTCACCGGCGACTCTCTGGGTGCGGGCAAGCCCGCCTCGGGCGCGGGCATCTCCAAGGCGCTCGAATCCGGTTTGGCCGCAGGTGAATGCGCGATCGCGGCGCTGCAGAACGGTGGCCCCGACGACTTCACCAACTACGCGCAGCGCATGGAGGCCGCGTGGGGGCGCGAGTACCGCCGTGGCCGCTACATGCACAAGTTGATCGGTAAGCCCAAGCTGGCAGAGGCCGGCGTGAAGCTGATCGACAACGCCGCCTTCCGCGACCGCATGCTCAAGGCCCTCTACAAGAAGGCCCAGGGCCCGCAGCACGTCATCAAGAAGTAA

Protein Sequence 

>Ms2308_MSMEG2308_protein
MTQRYDLVIAGGGPSGSAAAWQAAQTGAKVVVLDKAEFPRDKPCGDGLTARAVSYLQKMGLADEVATYHRVNRVTVFSPSEWELSFPRRPGMPDHGHTVSRTHLDTVLLKHAESAGAEVRQGAEVAGPEFDANGRVIGVVLKSGEKVYGDAVIAADGAYSPIKRALKIDSEYNGYSAIAIRSEMHANRPDSDSLDIYLKLVFQGDQLPGYGWVFPMGNGMFNIGLGYVNSYKNWQSINATQFLGEFLRSLPREWELPPIEELKKNKSVRAWRLPMGFTAWPPWRPGVLFTGDSLGAGKPASGAGISKALESGLAAGECAIAALQNGGPDDFTNYAQRMEAAWGREYRRGRYMHKLIGKPKLAEAGVKLIDNAAFRDRMLKALYKKAQGPQHVIKK

Essentiality:

Call Condition Type Source Notes
Unknown in vitro CRISPRi [Bosch & DeJesus et al. (2021)]
Growth Advantage in vitro TnSeq [Dragset et al. (2019)]

You do not have permission to view notes.