MSMEG1026
ms1026
-
M. smegmatis · MC2-155
[AlphaFold] [Orthologs] [Phyre2] [UniProt] [MycoBrowser] [TnSeq DB] [SeqHub]
MC2-155 Coordinates: 1093566 – 1094417
Vulnerability Index (VI):
M. tuberculosis homologs
M. abscessus homologs MAB2396
background  +5   0  -5 -10 -15 sgRNA L2FC (+ATc/–ATc) TnSeq Gene Essentiality Predictions (1, 2) Essential Growth Defect Non-Essential Growth Advantage Unknown Operon Legend (3) Operon (1) PMID: 28096490 (2) PMID: 31388080 (3) PMID: 26536359 MSMEG1021 MSMEG1022 MSMEG1023 MSMEG1024 MSMEG1025 MSMEG1026 MSMEG1027 MSMEG1028 MSMEG1029
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>ms1026_MSMEG1026_dna
GTTGGTCGTGGCGCTGGTGTGCAACGAGCTCATCCGGCCGGTGTCGTCGAAATGGCATGAGCCCGCGACCGATACCACCGATCCGATTGCCGAGGAGGCCCGCCGGTGAGCGAAACACCAGTCGAACTGCACGAATACCAGCCGACCGTGCCGAAGGTGTACATCGCGTTGGCATGGCTGTGGGTCGCCGTGCCCTTCGCCTACGGCGTATACCAGCTGCTGCTCAAGGTCGGTCAACTGTTCGGGTAGCCGGACGAAAATGGGTGGAGCGCAGCGGCGTATCCAGGCACCCTGGAGCCGTGACCGTACAGCTGCACCCGTCGCCGTCGGCGTTCGAACCGGTGGCCGGTGCGGTGTACCGCGCCGACCCGGTTCTGTTCACCAATGAGCTGACGGCGCTTCGGACCTCCCCGTGGCCCGCCGGTCAGGTGCTGCTGTCGGTGTCGGACGAGTCGACACCGGTGGGTGCGGCGGTCCAGATGCGGGGTTCGGTGCTCCTGGTCAGCGGGCTCCCACCACACGTCGCCGCTGCCGCGGCCTGCGAGCTGGTCGAAGTTCAACCGGCCCTGCCGGAGGTGCGTGGGACCCCCGAGGCGACAATGGCTTTCGCGCAGGCGTGGCAGAGCGTGACGGACATACGGGTGATCCCGGGTACAACGGACGTGCTCTACCGGCTGGGGGAGTTGACCCCGCCGGTCGGTGTGTCGGGAGACTGGCGGCCGGCGCACGACGAGGACACGGATCTGCTGTCGGCCTGGCTGGACGCGTTCTACGTCGAGGCGTTCGGCTCCGAGCCCGACATCGACGCGGCTCGCGTTGGGCTGCAGGCGATCTACGACGCGGGTGGACAGATCCTGGTGTGGACGGCGGCCGGGGTGCCCGTGTGCATGGCGCGGGTCCACGCGTGCATCGACGGCATGGCGCGGATCGGCCCGGTCTACACCCCACCCGAACACCGCGGCCACGGGTATGCCGCGGCGCTGACGTCGGTCGCATCGCGCGCGGCATTGGACCGGGGCGTGCGCGACGTGGTGTTGTTGGCCGATGCGGCCAATCCGGTGTCCAATCGGGTCTACCAGCGCATCGGCTTTGCGGCCGTGGCCGAGAACGTGCGGTACCAGTTCACTCCGATGGCCGACGCAGCCCGTTGA

Protein Sequence 

>Ms1026_MSMEG1026_protein
VTVQLHPSPSAFEPVAGAVYRADPVLFTNELTALRTSPWPAGQVLLSVSDESTPVGAAVQMRGSVLLVSGLPPHVAAAAACELVEVQPALPEVRGTPEATMAFAQAWQSVTDIRVIPGTTDVLYRLGELTPPVGVSGDWRPAHDEDTDLLSAWLDAFYVEAFGSEPDIDAARVGLQAIYDAGGQILVWTAAGVPVCMARVHACIDGMARIGPVYTPPEHRGHGYAAALTSVASRAALDRGVRDVVLLADAANPVSNRVYQRIGFAAVAENVRYQFTPMADAAR

Essentiality:

Call Condition Type Source Notes
Unknown in vitro CRISPRi [Bosch & DeJesus et al. (2021)]
Non Essential in vitro TnSeq [Dragset et al. (2019)]

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