MSMEG1036
ms1036
-
M. smegmatis · MC2-155
[TnSeq DB] [SeqHub]
MC2-155 Coordinates: 1104605 – 1106046
Vulnerability Index (VI):
M. tuberculosis homologs
M. abscessus homologs
 +5   0  -5 -10 -15 sgRNA L2FC (+ATc/–ATc) TnSeq Gene Essentiality Predictions (1, 2) Essential Growth Defect Non-Essential Growth Advantage Unknown Operon Legend (3) Operon (1) PMID: 28096490 (2) PMID: 31388080 (3) PMID: 26536359 (4) PMID: 38418874 (5) PMID: 29326668 MSMEG1034 MSMEG1035 MSMEG1036 MSMEG1037 MSMEG1038 MSMEG1039 ctaD
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>ms1036_MSMEG1036_dna
TCGATGATCGGCGGCATCCCCGAGACCCAGGAGATGCTCGACTTCTGCGCCGAACACGACGTCCGGCCGGAGATCGAGATCATCACCCCCGACTACATCAACGAGGCCTACGAGCGCGTCCTGGCCAGCGATGTGCGCTACCGCTTCGTGATCGACACCGCGTCGCTGCGTAGCTGACGTCATCCACAAAAGGCAGCCGGCCCCCGGGCCGGCTGCCTTTTGCCGTCACGGGTAACAATCGCGATGAGCGCAACCGGTGACGTGGCGCACCCGCATTGGCAGTCTCGTGCGGTGACCCGTGTGATTCGCTTCAACGCCTTCGACATGAACTGTGTCGCCCATCAATCCCCCGGCCTGTGGCGGCATCCCGAAGACCAGTCCTGGCGGTACAAGGACCTCACCTACTGGACAGAACTCGCAAAGCTGTTGGAGCGCGGCCGATTCGACGGCCTGTTCATCGCCGACGTGCTCGGTACCTACGACGTGTACGGCGGCAGCGACGAGGCCGCGATCCGTCACGCCGCGCAGGTCCCGGTGAACGACCCGATGCTGCTGGTGTCCGGGATGGCGCTGGTCACCGAGCATCTCGGGTTCGGCATCACCACCGGAACCGGTTTCGAGCATCCCTATCCGTTCGCGCGACGGATGTCCACGCTCGACCATCTGACGGGCGGCCGCATCGGCTGGAACGTCGTCACCGGTTACCTGCCCGCCGCGGCCCGCAACATGGGCCAGACCGACCAGCCGGCCCACGACGCGCGCTACGACCACGCCGACGAGTACCTCGAGGTGCTCTACAAGCTGTGGGAGGGCTCATGGGAGGACGACGCGGTGGTGCGCGACCGTGCCCGCGGCGTGTTCACCGACCCGGGCAAGGTGCATCACATCGGCCATGAGGGAACGCATTTCAGCGTTCCTGGCATCCACCTGTCCGAGCCGTCACCGCAGCGCACGCCCGTCATCTACCAGGCCGGCTCGTCGCCGCGCGGTGTCCGCTTCGCCGCGGAGAACGCCGAGGCGATCTTCACCGCGGCTCCCACCAAAGCCCTTCTGCGTGAGACGGTCACGACGATCCGCCGTGAGCTCGAGATCGCCGGCCGCGACCCGTACGGCGTGAAGATCTTCAACCTCTCGACGATCATCACCGGCGCCACCGACGAGGAGGCCGCAGCCAAGCTGGCCGAGTACTTGTCCTACGGCGACCCCGAGGGCGCACTGGTGTTCATGTCGGGCTGGATGGGTGTGGACCTGGCCCGCTACGGCCTCGACGAGCCTGTCGGCAATGTCGACTCCAACGCGATCCTGTCCGCGGTCGAGGCGTTCCAGTCCGCCGACCCCGACGGCGGCGAGTGGGCGGTCGGCGACATCGCCGAGTGGGGCAAGATCGGCGGCATGGGCCCGCGCATCGTCGGATCGGGTGAGACCGTCGCCGACACGCTGCAGGAGTGGGTCGAGAGACCGACGTCGACGGCTTCAACCTGGCGTACGCGATCACGCCGGGATCGTTCGCCGACTTCGTCGACCACGTCGTGCCGGTGCTCACCGCACGCGGCGCCTACCAGGCCGAGTACACCCCCGGCACCCTGCGCCACAAGCTGATCGGTCAAGGCGATCGGCTGGCCGAAGAGCACCGCGGTGCGAGTTACCGTGTCGGGGCTAAGAATTCGACGATCATCGAGCGCCCGTCGACCGTGCCGTCGTCATCGGCGTCCACGGCCGCTCAGCCCACCCGCGGCCGGTAG

Protein Sequence 

>Ms1036_MSMEG1036_protein

Essentiality:

Call Condition Type Source Notes
Unknown in vitro CRISPRi [Bosch & DeJesus et al. (2021)]
Unknown in vitro TnSeq [Dragset et al. (2019)]

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