MSMEG2288
ms2288
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M. smegmatis · MC2-155
[AlphaFold] [Orthologs] [UniProt] [MycoBrowser] [TnSeq DB] [SeqHub]
MC2-155 Coordinates: 2370961 – 2371452
Vulnerability Index (VI):
M. tuberculosis homologs
M. abscessus homologs MAB3424c
background  +5   0  -5 -10 -15 sgRNA L2FC (+ATc/–ATc) TnSeq Gene Essentiality Predictions (1, 2) Essential Growth Defect Non-Essential Growth Advantage Unknown Operon Legend (3) Operon (1) PMID: 28096490 (2) PMID: 31388080 (3) PMID: 26536359 MSMEG2285 MSMEG2286 MSMEG2287 MSMEG2288 MSMEG2289 MSMEG2290 MSMEG2291
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>ms2288_MSMEG2288_dna
GACCAGCAGTGCGGGATAGGTCGCGACGGACGCGAGGCCTGCGATGCTTCCGGTCAGCCCGCCGGCGATACCGGCGAACACGAGCAGCACGACGTCCCAAACGGTCATGCGGCTCTCACGCCGATGACGTTACTGATTCAAATTGTTTGCACCCGCGCCGGGGCGAGGACTACCATCGCTGACGTGCTGAGGCGACTCGTAGTAGCAACCCGCAGCGGGGTCTGATTCGGACCGACCCCTCGCTGTGGGTCGTTGCTCTTCGTCGGTCACTCCCTTCAATCAGAGAAGACCGGCACAAAATGTTCACCGCACCAGCAATTCGCACTTCTTCCGCTTCGTCCTCGTCCTCGTTCGCGTCGTGCTTCGCCGCTCCACTGCCGCGCGGCCTGCGCGCCGTCGCCCAGGAGCAAACCTGGGACGCATTCCTGGCCCGGTTCGCCGCCATCGCGGGACCGGTCACGCTGCGCCAATGGTCGTGCGTCGACAGCCGTCCCACAGGCCAGATCGGCCCGCGCGAGTACCAGGCGACGCTGTCGATCGGCGACACCGTCGCCACGTCGAGCGTCACGGCCTACGGGCCCGTCGCCGCGCTGACCGAGATCCTGCACGCGCACGGCATCACCGTGGAGACCACGTCGTTCCACCAGTTGCCGACGCGGGGTCAGACCGCCACCTTCATCGAAGGCAGCAACGGCGTGCACCGTGAGTGGGCGATGGGGCTGGACACCGACCCGGTGCAGTCGGCGCTGCGCGCGGTCATCGCGTGCGCGAATCGCCTCACCGCGCACTAG

Protein Sequence 

>Ms2288_MSMEG2288_protein
MFTAPAIRTSSASSSSSFASCFAAPLPRGLRAVAQEQTWDAFLARFAAIAGPVTLRQWSCVDSRPTGQIGPREYQATLSIGDTVATSSVTAYGPVAALTEILHAHGITVETTSFHQLPTRGQTATFIEGSNGVHREWAMGLDTDPVQSALRAVIACANRLTAH

Essentiality:

Call Condition Type Source Notes
Unknown in vitro CRISPRi [Bosch & DeJesus et al. (2021)]
Growth Advantage in vitro TnSeq [Dragset et al. (2019)]

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