MSMEG2289
ms2289
-
M. smegmatis · MC2-155
MC2-155 Coordinates: 2371548 – 2373032
Vulnerability Index (VI):
M. tuberculosis homologs cyp136
M. abscessus homologs MAB3423, MAB2078, MAB2151c
background  +5   0  -5 -10 -15 sgRNA L2FC (+ATc/–ATc) TnSeq Gene Essentiality Predictions (1, 2) Essential Growth Defect Non-Essential Growth Advantage Unknown Operon Legend (3) Operon (1) PMID: 28096490 (2) PMID: 31388080 (3) PMID: 26536359 MSMEG2285 MSMEG2286 MSMEG2287 MSMEG2288 MSMEG2289 MSMEG2290 MSMEG2291 MSMEG2292
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence

>ms2289_MSMEG2289_dna
GCTCACTGATCGTGCTCACCGAGATGTCCGCGAACGGCTGTTCCTCGAGGAGTTCGCGCACGGCGGCGACGATGGCCTCCCGTTGCCGGTCGCCCCTGGAGCGACGGGCCTGCGCGGCGGTGGCGCCGGCAGAACCGTTGCTGCCCTGCGGTACGGATTCGGCGGTCATGGGTTTAAACCTTGGCACCCGCGACGCGCCAAATCAAAACTTGACATGCGTCAAGTATGACATCCAAGATGAGTGTCACAAGTGACGTCCACCACAGACTTGCAACGTCAGCAACGTCAGGAGCGCGATACATGCCCACCACCATCAGTACTCCCCGCTATCTGTTGGATCAGGCACGGCGCCGATTCACGCCCACGCCCAACACCATCCCCGGCATGGGAGCCATCGAGAAGCGGCTGAAGCGCAAGCAGTGGGACCAGTTCGTGTTCTCCACCCCGCCCGCAGGCAGCGGTCTCAAGCCGATCATGGGCGACTCCGGCCTGCCGGTCCTCGGGCACATGATCGAGATCTTCCGCGGCGGCCCCGACTTCATCCTGGAGCAATACCGCCGCAACGGCCCGATCCACTACGCCTACTCACCTGCGTTGTCGTCGGTGATGGCGCTGGGCCCGGACGCCACCCAGACGGTCTTCTCGAACCGCAACAAGGACTACTCGCAGCGTGCGTGGGATCCGGTGATCGGGCCGTTCTTCGAAGGTGGCCTGATGCTGCTCGACTTCGACGAGCACATGTACCACCGCCGGATCATGCAGGACGCGTTCACCCGCTCGCGGCTCACCGGGTACATCCCGCACATCGACTCGGTCGCGTCGCAGGTCCTGGCCAACGACTGGGTGTCCGACGATCCGCGGTTCCTGTTCTATCCGGCCATCAAGGAACTGACGCTCGACATCGCCTCCGAGGTGTTCATGGGCGTCCCGGCCGGCACCGACAAGAAGCTCGTCACGACCGTGAACCACGCGTTCACCACCACCACGCGCGCGGGCAACGCGATCGTGCGCACGCCGGTCCCGCCGTTGAAGTGGTGGCGCGGCATCCAGGCGCGCAAGACACTCGAGGACTACTTCCTCAGCCGCATCGACGAGAAGCGCCGCGCCGAGAGCACCGACATGTTCAGCGTGCTGTGCCACTCGGCCGACGAGGACGGCCAGACCTTCACCGACGACCAGATCGTCAGCCACATGATCTTCCTCATGATGGCCGCACACGACACGTCGACGTCGACCATGACCACCATGGCCTACCACCTGGCGGCCAATCCCGAGTGGCAGGACCGGCTGCGTGACGAGTCCGAGCGCATCGGCGACGGCCCGCTCGACATCGAGGCGCTGGAGAAGCTGGAGACCTACGACCTGGTGATCAACGAGGCGCTGCGGATGATGACGCCGCTGCCCTTCAACTTCCGCCAGGCCGTGCGCGACACCGAACTGCTGGGTTACTTCATCCCGGCCGGCACCAACGTGGTCACCTGGCCGTCGATCAACCACCGGCTGCCCGAACTGTGGACCGATCCGGAGAAGTTCGACCCGGAGCGCTTCGCCGAGCCGCGCAGCGAGCACAAGAAGCACCGCTACGCGTTCGCACCGTTCGGTGGCGGCGCCCACAAGTGCATCGGCATGGTGTTCGGCCAGCTGGAGATCAAGACCGTCATGCACCGCCTGCTGCGCCAGTACCGCCTGGAGCTGCCGCGTCCGGGTTACACGCCGCGCTACGACTACGGCGGCATGCCGGTGCCGATCGACGGGATGCCGATCGTGCTGCGTCCGCTGCGCTGA

Protein Sequence

>Ms2289_MSMEG2289_protein
MPTTISTPRYLLDQARRRFTPTPNTIPGMGAIEKRLKRKQWDQFVFSTPPAGSGLKPIMGDSGLPVLGHMIEIFRGGPDFILEQYRRNGPIHYAYSPALSSVMALGPDATQTVFSNRNKDYSQRAWDPVIGPFFEGGLMLLDFDEHMYHRRIMQDAFTRSRLTGYIPHIDSVASQVLANDWVSDDPRFLFYPAIKELTLDIASEVFMGVPAGTDKKLVTTVNHAFTTTTRAGNAIVRTPVPPLKWWRGIQARKTLEDYFLSRIDEKRRAESTDMFSVLCHSADEDGQTFTDDQIVSHMIFLMMAAHDTSTSTMTTMAYHLAANPEWQDRLRDESERIGDGPLDIEALEKLETYDLVINEALRMMTPLPFNFRQAVRDTELLGYFIPAGTNVVTWPSINHRLPELWTDPEKFDPERFAEPRSEHKKHRYAFAPFGGGAHKCIGMVFGQLEIKTVMHRLLRQYRLELPRPGYTPRYDYGGMPVPIDGMPIVLRPLR

Essentiality:

Call Condition Type Source Notes
Unknown in vitro CRISPRi [Bosch & DeJesus et al. (2021)]
Growth Advantage in vitro TnSeq [Dragset et al. (2019)]

You do not have permission to view notes.