MSMEG2306
ms2306
-
M. smegmatis · MC2-155
[AlphaFold] [Orthologs] [Phyre2] [UniProt] [MycoBrowser] [TnSeq DB] [SeqHub]
MC2-155 Coordinates: 2386828 – 2387679
Vulnerability Index (VI):
M. tuberculosis homologs
M. abscessus homologs MAB2396
background  +5   0  -5 -10 -15 sgRNA L2FC (+ATc/–ATc) TnSeq Gene Essentiality Predictions (1, 2) Essential Growth Defect Non-Essential Growth Advantage Unknown Operon Legend (3) Operon (1) PMID: 28096490 (2) PMID: 31388080 (3) PMID: 26536359 MSMEG2301 MSMEG2302 MSMEG2303 MSMEG2304 MSMEG2305 MSMEG2306 MSMEG2307 MSMEG2308 MSMEG2309
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>ms2306_MSMEG2306_dna
GTTGGTCGTGGCGCTGGTGTGCAACGAGCTCATCCGGCCGGTGTCGTCGAAATGGCATGAGCCCGCGACCGATACCACCGATCCGATTGCCGAGGAGGCCCGCCGGTGAGCGAAACACCAGTCGAACTGCACGAATACCAGCCGACCGTGCCGAAGGTGTACATCGCGTTGGCATGGCTGTGGGTCGCCGTGCCCTTCGCCTACGGCGTATACCAGCTGCTGCTCAAGGTCGGTCAACTGTTCGGGTAGCCGGACGAAAATGGGTGGAGCGCAGCGGCGTATCCAGGCACCCTGGAGCCGTGACCGTACAGCTGCACCCGTCGCCGTCGGCGTTCGAACCGGTGGCCGGTGCGGTGTACCGCGCCGACCCGGTTCTGTTCACCAATGAGCTGACGGCGCTTCGGACCTCCCCGTGGCCCGCCGGTCAGGTGCTGCTGTCGGTGTCGGACGAGTCGACACCGGTGGGTGCGGCGGTCCAGATGCGGGGTTCGGTGCTCCTGGTCAGCGGGCTCCCACCACACGTCGCCGCTGCCGCGGCCTGCGAGCTGGTCGAAGTTCAACCGGCCCTGCCGGAGGTGCGTGGGACCCCCGAGGCGACAATGGCTTTCGCGCAGGCGTGGCAGAGCGTGACGGACATACGGGTGATCCCGGGTACAACGGACGTGCTCTACCGGCTGGGGGAGTTGACCCCGCCGGTCGGTGTGTCGGGAGACTGGCGGCCGGCGCACGACGAGGACACGGATCTGCTGTCGGCCTGGCTGGACGCGTTCTACGTCGAGGCGTTCGGCTCCGAGCCCGACATCGACGCGGCTCGCGTTGGGCTGCAGGCGATCTACGACGCGGGTGGACAGATCCTGGTGTGGACGGCGGCCGGGGTGCCCGTGTGCATGGCGCGGGTCCACGCGTGCATCGACGGCATGGCGCGGATCGGCCCGGTCTACACCCCACCCGAACACCGCGGCCACGGGTATGCCGCGGCGCTGACGTCGGTCGCATCGCGCGCGGCATTGGACCGGGGCGTGCGCGACGTGGTGTTGTTGGCCGATGCGGCCAATCCGGTGTCCAATCGGGTCTACCAGCGCATCGGCTTTGCGGCCGTGGCCGAGAACGTGCGGTACCAGTTCACTCCGATGGCCGACGCAGCCCGTTGA

Protein Sequence 

>Ms2306_MSMEG2306_protein
VTVQLHPSPSAFEPVAGAVYRADPVLFTNELTALRTSPWPAGQVLLSVSDESTPVGAAVQMRGSVLLVSGLPPHVAAAAACELVEVQPALPEVRGTPEATMAFAQAWQSVTDIRVIPGTTDVLYRLGELTPPVGVSGDWRPAHDEDTDLLSAWLDAFYVEAFGSEPDIDAARVGLQAIYDAGGQILVWTAAGVPVCMARVHACIDGMARIGPVYTPPEHRGHGYAAALTSVASRAALDRGVRDVVLLADAANPVSNRVYQRIGFAAVAENVRYQFTPMADAAR

Essentiality:

Call Condition Type Source Notes
Unknown in vitro CRISPRi [Bosch & DeJesus et al. (2021)]
Non Essential in vitro TnSeq [Dragset et al. (2019)]

You do not have permission to view notes.