MSMEG1007
ms1007
-
M. smegmatis · MC2-155
[AlphaFold] [Orthologs] [Phyre2] [UniProt] [MycoBrowser] [TnSeq DB] [SeqHub]
MC2-155 Coordinates: 1076746 – 1077507
Vulnerability Index (VI):
M. tuberculosis homologs
M. abscessus homologs MAB3982
background  +5   0  -5 -10 -15 sgRNA L2FC (+ATc/–ATc) TnSeq Gene Essentiality Predictions (1, 2) Essential Growth Defect Non-Essential Growth Advantage Unknown Operon Legend (3) Operon (1) PMID: 28096490 (2) PMID: 31388080 (3) PMID: 26536359 MSMEG1003 MSMEG1005 MSMEG1006 MSMEG1007 MSMEG1008 MSMEG1009 MSMEG1010
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>ms1007_MSMEG1007_dna
GCTCCTGGGCGACGGCGCGCAGGCCGCGCGGCAGTGGAGCGGCGAAGCACGACGCGAACGAGGACGAGGACGAAGCGGAAGAAGTGCGAATTGCTGGTGCGGTGAACATTTTGTGCCGGTCTTCTCTGATTGAAGGGAGTGACCGACGAAGAGCAACGACCCACAGCGAGGGGTCGGTCCGAATCAGACCCCGCTGCGGGTTGCTACTACGAGTCGCCTCAGCACGTCAGCGATGGTAGTCCTCGCCCCGGCGCGGGTGCAAACAATTTGAATCAGTAACGTCATCGGCGTGAGAGCCGCATGACCGTTTGGGACGTCGTGCTGCTCGTGTTCGCCGGTATCGCCGGCGGGCTGACCGGAAGCATCGCAGGCCTCGCGTCCGTCGCGACCTATCCCGCACTGCTGGTCGTCGGCCTGCCGCCCGTGGCGGCCAATGTCACGAACACCGTCGCGGTCGTGTTCAACGGCGTCGGGTCGATCGCGGGCTCACGGCCCGAGCTGGCGGGGCAGGGCGCGTGGCTCAAACGGATCATCCCGGTCGCGGCGCTCGGCGGCGTCGCGGGCGCGGCCCTGCTGCTGTCGACGCCCGCGGAGGGCTTCGAGAAGATCGTGCCGTTCCTGCTCGGATTCGCCTCGGTGGCGATCCTGCTGCCCCGCAGGGAACATCGCTCGGCACGTGTGGCCAACCATCGCGACCATCTCATCCGCACCGGCGTCGAGGCCGCCGCGATCTTCCTGATCACCATCTACGGCGGCTATTTCGGGGCCGCGGCCGGTGTGCTGCTGCTGGCGCTGATGTTGCGGGCCGGCGGCGCGACGCTCCCGCACGCCAACGCGGGCAAGAACGTCATCCTCGGTGTCGCCAACCTCGTGGCGTCCGCGATCTTCGTGGTGTTCGCCCCGGTCTACTGGCCCGCGGTCGTGCCGCTGGGCATCGGCTGCCTCATCGGCAGCCGTCTCGGGCCGATCATCGTCCGCCACGCCCCGTCGACACCGCTGCGGTGGCTCATCGGTGTGGCCGGTATCGCGCTGGCGATCAAGCTCGCGCTCGACACGTACTGA

Protein Sequence 

>Ms1007_MSMEG1007_protein
MTVWDVVLLVFAGIAGGLTGSIAGLASVATYPALLVVGLPPVAANVTNTVAVVFNGVGSIAGSRPELAGQGAWLKRIIPVAALGGVAGAALLLSTPAEGFEKIVPFLLGFASVAILLPRREHRSARVANHRDHLIRTGVEAAAIFLITIYGGYFGAAAGVLLLALMLRAGGATLPHANAGKNVILGVANLVASAIFVVFAPVYWPAVVPLGIGCLIGSRLGPIIVRHAPSTPLRWLIGVAGIALAIKLALDTY

Essentiality:

Call Condition Type Source Notes
Unknown in vitro CRISPRi [Bosch & DeJesus et al. (2021)]
Growth Advantage in vitro TnSeq [Dragset et al. (2019)]

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