MSMEG1010
ms1010
-
M. smegmatis · MC2-155
[AlphaFold] [Orthologs] [Phyre2] [UniProt] [MycoBrowser] [TnSeq DB] [SeqHub]
MC2-155 Coordinates: 1079902 – 1080561
Vulnerability Index (VI):
M. tuberculosis homologs Rv3058c, Rv0302
M. abscessus homologs MAB3422c, MAB4312, MAB1217c
background  +5   0  -5 -10 -15 sgRNA L2FC (+ATc/–ATc) TnSeq Gene Essentiality Predictions (1, 2) Essential Growth Defect Non-Essential Growth Advantage Unknown Operon Legend (3) Operon (1) PMID: 28096490 (2) PMID: 31388080 (3) PMID: 26536359 MSMEG1007 MSMEG1008 MSMEG1009 MSMEG1010 MSMEG1011 MSMEG1012 MSMEG1013
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>ms1010_MSMEG1010_dna
CTTGAGACCGCTGCCTGCGGGCGGGGTGGAGAACACGAACTGGTCCCACTGCTTGCGCTTCAGCCGCTTCTCGATGGCTCCCATGCCGGGGATGGTGTTGGGCGTGGGCGTGAATCGGCGCCGTGCCTGATCCAACAGATAGCGGGGAGTACTGATGGTGGTGGGCATGTATCGCGCTCCTGACGTTGCTGACGTTGCAAGTCTGTGGTGGACGTCACTTGTGACACTCATCTTGGATGTCATACTTGACGCATGTCAAGTTTTGATTTGGCGCGTCGCGGGTGCCAAGGTTTAAACCCATGACCGCCGAATCCGTACCGCAGGGCAGCAACGGTTCTGCCGGCGCCACCGCCGCGCAGGCCCGTCGCTCCAGGGGCGACCGGCAACGGGAGGCCATCGTCGCCGCCGTGCGCGAACTCCTCGAGGAACAGCCGTTCGCGGACATCTCGGTGAGCACGATCAGTGAGCGCGCCGGTGTCGCCCGGTCGGGCTTCTACTTCTACTTCGATTCCAAGTACGCGGTGCTGGCCGTGATCCTGGCCGAGGCGATGGAAGAACTCGACGCGCTCACGCACAACTTCGCGCCGCGCGGTGAGAACGAGTCGCCTGCCGCATTCGCCAAGCGCATGGTGGGCAGCGCCGCGGCGGTGTACGCCACCAACGACCCGGTCATGTCGGCCTGCACCGTCGCGCAGAACACCGACGCGCAGATCCGCGACATCATGAACGACTTCGAGGACGCCACGATCGCCAAGATCGTCGGCGTCATCGAACAGGACACCGGAGCCCGGCCGATCTCCGACGATCTGCCCGCACTGGTGCGCACCCTGACCGCGACCACGGCGATGACACTGTCGCGTGACGCCGGGTTCGTGGGCCGTGACGCCGATCCCGCGCGTGCCGTCGAGATCGTCGAACGCCTGTGGCTCAGCGCGCTGTGGGGTGGCCTGCCGGAGTAG

Protein Sequence 

>Ms1010_MSMEG1010_protein
MTAESVPQGSNGSAGATAAQARRSRGDRQREAIVAAVRELLEEQPFADISVSTISERAGVARSGFYFYFDSKYAVLAVILAEAMEELDALTHNFAPRGENESPAAFAKRMVGSAAAVYATNDPVMSACTVAQNTDAQIRDIMNDFEDATIAKIVGVIEQDTGARPISDDLPALVRTLTATTAMTLSRDAGFVGRDADPARAVEIVERLWLSALWGGLPE

Essentiality:

Call Condition Type Source Notes
Unknown in vitro CRISPRi [Bosch & DeJesus et al. (2021)]
Growth Advantage in vitro TnSeq [Dragset et al. (2019)]

You do not have permission to view notes.