MSMEG1015
ms1015
-
M. smegmatis · MC2-155
[AlphaFold] [Orthologs] [Phyre2] [UniProt] [MycoBrowser] [TnSeq DB] [SeqHub]
MC2-155 Coordinates: 1085358 – 1085972
Vulnerability Index (VI):
M. tuberculosis homologs Rv3055, Rv3405c, Rv2506, Rv0078, Rv1019, [+ 2 remaining orthologs]
M. abscessus homologs MAB3418, MAB0476c, MAB2290, MAB4384, MAB3151, [+ 4 remaining orthologs]
background  +5   0  -5 -10 -15 sgRNA L2FC (+ATc/–ATc) TnSeq Gene Essentiality Predictions (1, 2) Essential Growth Defect Non-Essential Growth Advantage Unknown Operon Legend (3) Operon (1) PMID: 28096490 (2) PMID: 31388080 (3) PMID: 26536359 MSMEG1012 MSMEG1013 dinB MSMEG1015 MSMEG1016 MSMEG1017 MSMEG1019
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>ms1015_MSMEG1015_dna
GCAGCGCCGCGGCCGGCTCGGGCACATCAGCGGTGTCGATGTCTTCGTTGTAGAACGGCACCTCGGCCAGCCGGTCGAACACCTGCAGGTCCACACCGTCGGGCGCGGTCTCGACTGCCAGTTCGGCGAGTTGGCGGTTGATGGACGCCGCCCGGAGGCTGCCGACGAGTACCAACACCTTGATTTCGGCCATGAGCCGTCCTTTCATGAGATTCTTGTGGTCGGGTTTCGTCCCCGATCAACCGGACCGCAGTCCGATTCATTCCCACTCGGCCGGATTCACAGAAATTCACAGATAAGGTGGCTGTCGTGGCAGCCACTGACCGCTCCGTCCGGCTCGAGGTCACCGACCGCGCGCCGCAGGAGCGCGGCGACGCCGCCCGGAACCGGGCCGCGATCCTCGACGCGGCGCGCCGGCTCATCGCCGAGCGCGGACCCGACGCCGTGAGCACCGACGACATCGCCGTCGAGGCCGGCGTCGGCAAGGGCACCCTGTTCCGCCGCTTCGGCACCCGCGCCGGGCTGATGATGGTGCTGCTCGACGAGGACGAGAAGGCCCACCAGGACGCGTTCATCTTCGGGCCGCCGCCGCTCGGTCCCGGGGCCCCTCCCCTCGACCGTCTGCTCGCCTACGGCCGCGAACGGATGAAGTTCGTCCGCGAGCACCACGCACTGCTCTCCGACGCCGCGCGCGATCCGCAGGCACGCTTCGGCGGGCCGGACACGCTGCACCGGTCCCACGTCCGGATGCTGCTGCAGGCCGCGGGGACCACGGGCGACCTCGACGCACAGGCCGACGCGCTCGTCGCGCTGCTCGACGCCGACTACGTCGCCTACCAACTGGAACGCGGACGCAGCTGCGAGGTCCAGGCCGCCGCCTGGGCCGACACCGCACGTAAGTTGTGTGGCCACTAG

Protein Sequence 

>Ms1015_MSMEG1015_protein
VAVVAATDRSVRLEVTDRAPQERGDAARNRAAILDAARRLIAERGPDAVSTDDIAVEAGVGKGTLFRRFGTRAGLMMVLLDEDEKAHQDAFIFGPPPLGPGAPPLDRLLAYGRERMKFVREHHALLSDAARDPQARFGGPDTLHRSHVRMLLQAAGTTGDLDAQADALVALLDADYVAYQLERGRSCEVQAAAWADTARKLCGH

Essentiality:

Call Condition Type Source Notes
Unknown in vitro CRISPRi [Bosch & DeJesus et al. (2021)]
Growth Advantage in vitro TnSeq [Dragset et al. (2019)]

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