MSMEG1047
ms1047
-
M. smegmatis · MC2-155
[AlphaFold] [Orthologs] [Phyre2] [UniProt] [MycoBrowser] [TnSeq DB] [SeqHub]
MC2-155 Coordinates: 1115548 – 1116369
Vulnerability Index (VI):
M. tuberculosis homologs Rv3040c
M. abscessus homologs MAB3383c
background  +5   0  -5 -10 -15 sgRNA L2FC (+ATc/–ATc) TnSeq Gene Essentiality Predictions (1, 2) Essential Growth Defect Non-Essential Growth Advantage Unknown Operon Legend (3) Operon (1) PMID: 28096490 (2) PMID: 31388080 (3) PMID: 26536359 MSMEG1043 MSMEG1044 MSMEG1045 MSMEG1046 MSMEG1047 MSMEG1048 MSMEG1049 MSMEG1050 MSMEG1051
Click the tabs above to view different types of data for this gene. The Vulnerability tab shows CRISPRi fitness data.
DNA and Protein Sequence help

DNA Sequence 

>ms1047_MSMEG1047_dna
CGCGGCCGGGCTCGACCTCGGCGGCCGCGAGGACCTCGTGGCCCGTCTCACCGACCTCGCCGCCGACCCCGATGCACCGGCCATGGTGCTCGTGACGCACCATGTCGAGGAGATCCCGGTCGGGTTCAGCCACGGCTTGATCCTGTCCGAGGGCAAGGTGGTGGCCTCCGGTCTGCTCACCGATGTGCTGACGTCCGAGAACCTGTCCAAGGCATTCGGCCAGGCCATCGCCCTCGAGGTGATCGACGGACGGTACTTCGCGCGCCGGGTGAGGAGCCGGGCAGCGCACAGGAGGCGAAATGACTGACGACCCGCTGGTCCCGCTGCCCGCCGCGACGGTGATGCTGATCCGCGACGTGCACCGCGAGGGACGTGCGGATCTCGAGGTGTTCCTGATGCGAAGGCACGCCGCGATGGACTTCGTCGCCGGCGTGATGGTGTTCCCGGGCGGTGGCGTCGACGACCGTGACCGCAACGCCGACATCGCGTGGTACGGACCCGAGCCGTCATGGTGGGCCCAGCGCCTCGGCGTCGACGAGGGGCTGGCCGAGGCGCTCGTGTGCGCCGCGGCGCGTGAGACGTTCGAGGAGTCCGGCGTGCTGTTCGCCGGCCCCCAGAACGGGCCCGGTGACCCCGGCATCATCGCCGACGCGTCGGTGTACGGCGACGCGCGCGCGGCCCTGGCCAACCACTCGCTGTCGTTCGCCGACTTCCTGCGCGACGAGAAGCTGGTGCTGCGCGCCGACCTGCTGCGGCCGTGGGCCAACTGGGTGACGCCCAAAGAGGAGCGCACACGGCGCTACGACACGTATTTCTTCGTCGCGGCCCTCCCGGAGGGCCAGCGCGCCGACGGCGAGAACACCGAGACCGACCGGGCGTTCTGGTGCACACCGAAAGCCGGGCTCGACGACTTCGAGGCGGGGAACACCTTCCTGCTGCCGCCGACCTGGACGCAGCTGGACTCCCTCGACGGCCGCACGGTGGCCGAGGTGCTGGCGGTCGAACGCAAGATCGTGACGATCGAGCCCAGCCTGTCGACCGAGGGCAACAACTGGGAGATCGAATACTTCGACAGCGGGCGCTACAACGCTGCACGCAAGCATCGGTCGCCCGGGCAATGA

Protein Sequence 

>Ms1047_MSMEG1047_protein
MTDDPLVPLPAATVMLIRDVHREGRADLEVFLMRRHAAMDFVAGVMVFPGGGVDDRDRNADIAWYGPEPSWWAQRLGVDEGLAEALVCAAARETFEESGVLFAGPQNGPGDPGIIADASVYGDARAALANHSLSFADFLRDEKLVLRADLLRPWANWVTPKEERTRRYDTYFFVAALPEGQRADGENTETDRAFWCTPKAGLDDFEAGNTFLLPPTWTQLDSLDGRTVAEVLAVERKIVTIEPSLSTEGNNWEIEYFDSGRYNAARKHRSPGQ

Essentiality:

Call Condition Type Source Notes
Unknown in vitro CRISPRi [Bosch & DeJesus et al. (2021)]
Non Essential in vitro TnSeq [Dragset et al. (2019)]

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